PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027339370.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family bHLH
Protein Properties Length: 179aa    MW: 20495.4 Da    PI: 9.3725
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027339370.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.25.3e-121661855
                    HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                    +Er+RR+++++ + +L +l+P++   +    s  + Le+A++YIk+Lq
  XP_027339370.1 16 IERNRRNQMKTLYRKLNSLVPHQ--SSRDPISLPDQLEEATNYIKKLQ 61
                    8*********************6..27777*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    
MENNPNSSRN IDRKFIERNR RNQMKTLYRK LNSLVPHQSS RDPISLPDQL EEATNYIKKL  60
QMNLEKMKDK KIMLLGIEKP NMRVNGGKTT VGLKSPRIEI QQMGSALEVV LVTGLDSQFM  120
FSESIRVLYE EGVDVVNASY KVVEDLVFHS IHCQVRESTS GAARISERLE NFIYDSSSS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1921RNIDRKFIERNRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.16e-53bHLH family protein