PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027339462.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MIKC_MADS

Protein Properties

Length: 196aa MW: 22439.4 Da PI: 9.4576

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027339462.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	95.3	2.7e-30	10	59	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rien + rqvtfskRrng+lKKA+ELSvLCdaeva+iifs++gklye++s XP_027339462.1 10 RIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFAS 59 8***********************************************86 PP
2	K-box	64.2	4.9e-22	83	154	9	80
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieel 80 e++ +++l+qe a+L k+ie L+ ++R+llGe+L+s+sl+eLqq+e+qLe+s++++R++K++ ll++ +l XP_027339462.1 83 DEQNMQQHLKQETANLMKKIELLEASKRKLLGEGLGSCSLEELQQIEEQLERSVSSVRARKEKTLLAENAKL 154 56777899*********************************************************9987765 PP

Sequence ? help Back to Top
Protein Sequence Length: 196 aa Download sequence
MVRGKTQMRR IENATSRQVT FSKRRNGLLK KAFELSVLCD AEVALIIFSP RGKLYEFASS 60 SMQETIERYR RHNRSAQTIH RSDEQNMQQH LKQETANLMK KIELLEASKR KLLGEGLGSC 120 SLEELQQIEE QLERSVSSVR ARKEKTLLAE NAKLSEQYGI PPQPATWDQR ENQPYAESSP 180 SSDVETELFI GLPRSG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45660.1	6e-66	MIKC_MADS family protein