PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027339705.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

ARF

Protein Properties

Length: 547aa MW: 61017.8 Da PI: 7.0088

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027339705.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	70.9	1.7e-22	7	107	1	98
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f+k+lt sd++++g +++ +++a+++ ++++ + +l+ +d++g++W +++i+r++++r++lt+GW+ Fv++++L +gD ++F + + XP_027339705.1 7 FCKTLTASDTSTHGGFSVLRRHADDClppldmtQQPPWQ--ELVATDLHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFL--RGE 97 99**************************975444444..8********************************************..449 PP EE..EEEEE- CS B3 89 efelvvkvfr 98 ++el+v+v+r XP_027339705.1 98 NGELRVGVRR 107 999***97 PP
2	Auxin_resp	111.8	6.6e-37	133	215	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a+ha++t++ F+v+Y+Pr+s+seF+v+v+k+++a ++k+svGmRfkm+fe+++++err+sGt+vgv d +++ W +S+WrsLk XP_027339705.1 133 ASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEARSHKLSVGMRFKMRFEGDEVPERRFSGTIVGVGDNKSSVWADSEWRSLK 215 789******************************************************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 547 aa Download sequence
MCTVHSFCKT LTASDTSTHG GFSVLRRHAD DCLPPLDMTQ QPPWQELVAT DLHGNEWHFR 60 HIFRGQPRRH LLTTGWSVFV SSKKLVAGDA FIFLRGENGE LRVGVRRLMR QQSNMPSSVI 120 SSHSMHLGVL ATASHAIATG TLFSVFYKPR TSRSEFIVSV NKYLEARSHK LSVGMRFKMR 180 FEGDEVPERR FSGTIVGVGD NKSSVWADSE WRSLKVQWDE PSSILRPDRV SPWELEPLMS 240 TPPTNSQPSQ RNKRPRPPVL PSAMPDSSLQ GVWKSPVYRD PQHGQDLYPS SKFNSTATSF 300 LGFGGNCSAS NMSTYWSSAM EKTTESFSPV AIKESGEKRQ GTGNGCRLFG IQLLENSSAE 360 ETLPTFALSG RVGDDRSLPS LDAESDQLSE PSNVNRSDIP SVSCDAEKSC LRSPQESQSR 420 HIRSCTKVHM QGMAVGRAVD LTRFDGYEDL LRKLEEMFDI KGELCGSTKK WQVVYTDNED 480 DMMMVGDDPW LEFCSVVRKI FIYTTEEVKK LSPKIGLPIN DEVKPSKMDS DAVVNPEDQS 540 SIVGPGC

Sequence ? help Back to Top

Protein Sequence Length: 547 aa Download sequence

MCTVHSFCKT LTASDTSTHG GFSVLRRHAD DCLPPLDMTQ QPPWQELVAT DLHGNEWHFR  60
HIFRGQPRRH LLTTGWSVFV SSKKLVAGDA FIFLRGENGE LRVGVRRLMR QQSNMPSSVI  120
SSHSMHLGVL ATASHAIATG TLFSVFYKPR TSRSEFIVSV NKYLEARSHK LSVGMRFKMR  180
FEGDEVPERR FSGTIVGVGD NKSSVWADSE WRSLKVQWDE PSSILRPDRV SPWELEPLMS  240
TPPTNSQPSQ RNKRPRPPVL PSAMPDSSLQ GVWKSPVYRD PQHGQDLYPS SKFNSTATSF  300
LGFGGNCSAS NMSTYWSSAM EKTTESFSPV AIKESGEKRQ GTGNGCRLFG IQLLENSSAE  360
ETLPTFALSG RVGDDRSLPS LDAESDQLSE PSNVNRSDIP SVSCDAEKSC LRSPQESQSR  420
HIRSCTKVHM QGMAVGRAVD LTRFDGYEDL LRKLEEMFDI KGELCGSTKK WQVVYTDNED  480
DMMMVGDDPW LEFCSVVRKI FIYTTEEVKK LSPKIGLPIN DEVKPSKMDS DAVVNPEDQS  540
SIVGPGC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	253	257	KRPRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G59750.2	0.0	ARF family protein