PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027339759.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family ARF
Protein Properties Length: 901aa    MW: 99894.3 Da    PI: 6.7429
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027339759.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B377.41.6e-24127228199
                     EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                     f+k+lt sd++++g +++p++ ae+        +++++  ++l+ +d++g++W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   +++
  XP_027339759.1 127 FCKILTASDTSTHGGFSVPRRAAEKVfppldfsQQPPA--QELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--WNE 217
                     99*****************************8544444..48************************************************..889 PP

                     EE..EEEEE-S CS
              B3  89 efelvvkvfrk 99 
                     + +l+++++r+
  XP_027339759.1 218 KNQLLLGIRRA 228
                     9999****997 PP
2Auxin_resp119.13.6e-39253336183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     aahaa+t+s F+++YnPras+seFv++++k++ka++ ++vsvGmRf+m fete+ss rr++Gt++g+sdld+vrWpnS+Wrs+k
  XP_027339759.1 253 AAHAAATNSRFTIFYNPRASPSEFVISLAKYVKAVYhTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDSVRWPNSHWRSVK 336
                     79*********************************9789******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 901 aa     Download sequence    
MKLSSAGFSP PPQEGEKRVL DSELWHACAG PLVSLPAVGS RVVYFPQGHS EQVAVSTNRE  60
VDGHIPNYPS LPPQLICQLH NVTMHADTET DEVYAQMTLQ PLSPQEQKEA YLPAELGTPS  120
KQPTNYFCKI LTASDTSTHG GFSVPRRAAE KVFPPLDFSQ QPPAQELIAR DLHGNEWKFR  180
HIFRGQPKRH LLTTGWSVFV SAKRLVAGDS VLFIWNEKNQ LLLGIRRANR PQPVMPSSVL  240
SSDSMHLGLL AAAAHAAATN SRFTIFYNPR ASPSEFVISL AKYVKAVYHT RVSVGMRFRM  300
LFETEESSVR RYMGTITGIS DLDSVRWPNS HWRSVKVGWD ESTAGERQPR VSLWEIEPLT  360
TFPMYPSPFP FRLKRPWPPG MPSFHAGLKD DDFGINSPLL WLRDPDRGLQ SLPFQGVGVS  420
PWMQPRHPSM VNLQTDMYQA MAAAALQDMR TLDPSKQHAT SLLQFQQPQN FPNRTSALMQ  480
TQMLQQSQHQ QAFPNSQENP HPSQSQAQTH THFQQHLQHQ HSFNNQNQHH LLQQQQQPQP  540
QQVIDHQQIS SAVSTMSQFV SAPQSQSPPM QAISSLGHQQ SFSDSNGNPA TTAIVSPLHS  600
ILSSFPQDEP SHLLNLPRTS SWVPVQPSGA WPSKRIALDP LLSSGASQCV LPQVEQLGQP  660
QSTISQNAIT LPPFPGRECA IEGSNDPQNH LLFGVNIEPS SLLVHNGMSS LKGVSSNSDS  720
PTIPFQSSNY LNTTGTDSSL NPGMTPNIGE LGFLPTPDNG GQGNPPTKTF VKVYKSGSFG  780
RSLDITKFTS YHELRSELAR MFGLEGELED PVRSGWQLVF VDQENDVLLL GDGPWPEFVN  840
SVWCIKILSP QEVQQMGHNG LELLNSVPIQ RLSDGICDDY TGREDPRNLS TGVTTVGSLN  900
Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.10.0ARF family protein