PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027339761.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family ARF
Protein Properties Length: 818aa    MW: 90939.1 Da    PI: 6.7787
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027339761.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B377.61.4e-2444145199
                     EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                     f+k+lt sd++++g +++p++ ae+        +++++  ++l+ +d++g++W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   +++
  XP_027339761.1  44 FCKILTASDTSTHGGFSVPRRAAEKVfppldfsQQPPA--QELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--WNE 134
                     99*****************************8544444..48************************************************..889 PP

                     EE..EEEEE-S CS
              B3  89 efelvvkvfrk 99 
                     + +l+++++r+
  XP_027339761.1 135 KNQLLLGIRRA 145
                     9999****997 PP
2Auxin_resp119.33.1e-39170253183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     aahaa+t+s F+++YnPras+seFv++++k++ka++ ++vsvGmRf+m fete+ss rr++Gt++g+sdld+vrWpnS+Wrs+k
  XP_027339761.1 170 AAHAAATNSRFTIFYNPRASPSEFVISLAKYVKAVYhTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDSVRWPNSHWRSVK 253
                     79*********************************9789******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 818 aa     Download sequence    
MHADTETDEV YAQMTLQPLS PQEQKEAYLP AELGTPSKQP TNYFCKILTA SDTSTHGGFS  60
VPRRAAEKVF PPLDFSQQPP AQELIARDLH GNEWKFRHIF RGQPKRHLLT TGWSVFVSAK  120
RLVAGDSVLF IWNEKNQLLL GIRRANRPQP VMPSSVLSSD SMHLGLLAAA AHAAATNSRF  180
TIFYNPRASP SEFVISLAKY VKAVYHTRVS VGMRFRMLFE TEESSVRRYM GTITGISDLD  240
SVRWPNSHWR SVKVGWDEST AGERQPRVSL WEIEPLTTFP MYPSPFPFRL KRPWPPGMPS  300
FHAGLKDDDF GINSPLLWLR DPDRGLQSLP FQGVGVSPWM QPRHPSMVNL QTDMYQAMAA  360
AALQDMRTLD PSKQHATSLL QFQQPQNFPN RTSALMQTQM LQQSQHQQAF PNSQENPHPS  420
QSQAQTHTHF QQHLQHQHSF NNQNQHHLLQ QQQQPQPQQV IDHQQISSAV STMSQFVSAP  480
QSQSPPMQAI SSLGHQQSFS DSNGNPATTA IVSPLHSILS SFPQDEPSHL LNLPRTSSWV  540
PVQPSGAWPS KRIALDPLLS SGASQCVLPQ VEQLGQPQST ISQNAITLPP FPGRECAIEG  600
SNDPQNHLLF GVNIEPSSLL VHNGMSSLKG VSSNSDSPTI PFQSSNYLNT TGTDSSLNPG  660
MTPNIGELGF LPTPDNGGQG NPPTKTFVKV YKSGSFGRSL DITKFTSYHE LRSELARMFG  720
LEGELEDPVR SGWQLVFVDQ ENDVLLLGDG PWPEFVNSVW CIKILSPQEV QQMGHNGLEL  780
LNSVPIQRLS DGICDDYTGR EDPRNLSTGV TTVGSLNY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.20.0ARF family protein