PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027339763.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family ARF
Protein Properties Length: 804aa    MW: 89376.5 Da    PI: 7.0501
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027339763.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B377.61.4e-2431132199
                     EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 
                     f+k+lt sd++++g +++p++ ae+        +++++  ++l+ +d++g++W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   +++
  XP_027339763.1  31 FCKILTASDTSTHGGFSVPRRAAEKVfppldfsQQPPA--QELIARDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--WNE 121
                     99*****************************8544444..48************************************************..889 PP

                     EE..EEEEE-S CS
              B3  89 efelvvkvfrk 99 
                     + +l+++++r+
  XP_027339763.1 122 KNQLLLGIRRA 132
                     9999****997 PP
2Auxin_resp119.33.1e-39157240183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     aahaa+t+s F+++YnPras+seFv++++k++ka++ ++vsvGmRf+m fete+ss rr++Gt++g+sdld+vrWpnS+Wrs+k
  XP_027339763.1 157 AAHAAATNSRFTIFYNPRASPSEFVISLAKYVKAVYhTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDSVRWPNSHWRSVK 240
                     79*********************************9789******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 804 aa     Download sequence    
MTLQPLSPQE QKEAYLPAEL GTPSKQPTNY FCKILTASDT STHGGFSVPR RAAEKVFPPL  60
DFSQQPPAQE LIARDLHGNE WKFRHIFRGQ PKRHLLTTGW SVFVSAKRLV AGDSVLFIWN  120
EKNQLLLGIR RANRPQPVMP SSVLSSDSMH LGLLAAAAHA AATNSRFTIF YNPRASPSEF  180
VISLAKYVKA VYHTRVSVGM RFRMLFETEE SSVRRYMGTI TGISDLDSVR WPNSHWRSVK  240
VGWDESTAGE RQPRVSLWEI EPLTTFPMYP SPFPFRLKRP WPPGMPSFHG LKDDDFGINS  300
PLLWLRDPDR GLQSLPFQGV GVSPWMQPRH PSMVNLQTDM YQAMAAAALQ DMRTLDPSKQ  360
HATSLLQFQQ PQNFPNRTSA LMQTQMLQQS QHQQAFPNSQ ENPHPSQSQA QTHTHFQQHL  420
QHQHSFNNQN QHHLLQQQQQ PQPQQVIDHQ QISSAVSTMS QFVSAPQSQS PPMQAISSLG  480
HQQSFSDSNG NPATTAIVSP LHSILSSFPQ DEPSHLLNLP RTSSWVPVQP SGAWPSKRIA  540
LDPLLSSGAS QCVLPQVEQL GQPQSTISQN AITLPPFPGR ECAIEGSNDP QNHLLFGVNI  600
EPSSLLVHNG MSSLKGVSSN SDSPTIPFQS SNYLNTTGTD SSLNPGMTPN IGELGFLPTP  660
DNGGQGNPPT KTFVKVYKSG SFGRSLDITK FTSYHELRSE LARMFGLEGE LEDPVRSGWQ  720
LVFVDQENDV LLLGDGPWPE FVNSVWCIKI LSPQEVQQMG HNGLELLNSV PIQRLSDGIC  780
DDYTGREDPR NLSTGVTTVG SLNY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.10.0ARF family protein