PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027339804.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

ARF

Protein Properties

Length: 1107aa MW: 122181 Da PI: 6.5095

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027339804.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	70.9	1.7e-22	143	244	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f+k+lt sd++++g +++p++ ae++ +++ + +l+ +d++++ W++++iyr+k++r++lt+GW+ Fv+ ++L +gD+v+F +++ XP_027339804.1 143 FCKQLTASDTSTHGGFSVPRRAAEKIfppldycVEPPVQ--ELVARDLHNNIWRFRHIYRGKPKRHLLTTGWSLFVSGKRLLAGDSVLFV--RDE 233 99**************************988555555..8********************************************..568 PP EE..EEEEE-S CS B3 89 efelvvkvfrk 99 +++l+++++r+ XP_027339804.1 234 KQQLLLGIRRA 244 8889**997 PP
2	Auxin_resp	113.2	2.5e-37	269	352	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aaha++++s+F+v+YnPras+seFv++++k+ ka++ +s+GmRf+m feteds +rr++Gt+vgvsdld+vrW+nS W +L+ XP_027339804.1 269 AAHAVANNSPFTVFYNPRASPSEFVIPLAKYYKAVYsYYISPGMRFRMTFETEDSGTRRYMGTIVGVSDLDSVRWKNSLWHNLQ 352 79*******************************97889***************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 1107 aa Download sequence
MSTDSTAMNT QPDAAAPNLG EGMTRGDDVG GERRSINPEL WQACAGPLRN LPSPGTHVVY 60 FPQGHSEQVA ASLKQDVDAQ IPNYPNLPSK LPCLLHNVTL HADPETDEVY AQMTLQPVQS 120 FDADALLRSD LSLKSSKPQP EFFCKQLTAS DTSTHGGFSV PRRAAEKIFP PLDYCVEPPV 180 QELVARDLHN NIWRFRHIYR GKPKRHLLTT GWSLFVSGKR LLAGDSVLFV RDEKQQLLLG 240 IRRANRQPIN ISSSVLSSDS MHIGILAAAA HAVANNSPFT VFYNPRASPS EFVIPLAKYY 300 KAVYSYYISP GMRFRMTFET EDSGTRRYMG TIVGVSDLDS VRWKNSLWHN LQVGWDDATA 360 GERQSRVSIW EIEPVTAPYF ICPPPFFRPK RPRLPGMLDD EPSDFNNLFK STMPWVGDDM 420 CINDSQALPG LSLVQWMSIQ QNPAPANSFQ SNYVPSMAGL VLQNLPSADT SNQLGFSTSQ 480 ISQSNNLSFD AQKILQTSQQ HDHIQKLPST SPPQQPRNLM SQTLPQSEVH TQLLNPQSLV 540 QTNNILQQQQ SSSQNHQLLR GLSQNPPQQH QVTTMGQNQL QNSIQSPMPD YVNHQLQMSD 600 NQVQLQLLQK LQQQQQTLLA KQSALQQPAQ LIQIPDQQRK LLDVAHNSRA LTPGQVLEIP 660 PTLQNSLPEA RSLTPQITMP SSQKNVQLSN LSKQPGLLSE ISGHVGLPPT ATTNLHSASG 720 CSILTGAGQS VITDDVPSCS TSPSSNNFAN ALPPVISSQI HRRTMVEDDM ALSAVTILSP 780 SVLETMSSNA NMVKDVHSKY EVKPSLNISK HQTQGNFAPK AYLNGGVQTD YLDSSSSATS 840 VFLFQSDTHM HQNNNPLSYN PQSMHCRDNT QNLDVQADSR TNIPYGNHIN GQMEMSPNLD 900 PLLTKGTMGL GKDLPNTISS GGLLGDYENN KDAPELSSSM VSHAFGVLDM SFNSIDSTIN 960 SSSFLNSGPR NPPSLPLPPP LLPPPSQQHQ FQRKRTYTKV YKRGAVGRSV DITRYSGYEE 1020 LKQDLALRFG IEGQLEDRQR IGWKLVYVDH ENDVLLVGDD PWEEFVNCVR CIKILSPQEV 1080 QQMSLDGDFS NGGLPYPAGS SSDGGNT

Sequence ? help Back to Top

Protein Sequence Length: 1107 aa Download sequence

MSTDSTAMNT QPDAAAPNLG EGMTRGDDVG GERRSINPEL WQACAGPLRN LPSPGTHVVY  60
FPQGHSEQVA ASLKQDVDAQ IPNYPNLPSK LPCLLHNVTL HADPETDEVY AQMTLQPVQS  120
FDADALLRSD LSLKSSKPQP EFFCKQLTAS DTSTHGGFSV PRRAAEKIFP PLDYCVEPPV  180
QELVARDLHN NIWRFRHIYR GKPKRHLLTT GWSLFVSGKR LLAGDSVLFV RDEKQQLLLG  240
IRRANRQPIN ISSSVLSSDS MHIGILAAAA HAVANNSPFT VFYNPRASPS EFVIPLAKYY  300
KAVYSYYISP GMRFRMTFET EDSGTRRYMG TIVGVSDLDS VRWKNSLWHN LQVGWDDATA  360
GERQSRVSIW EIEPVTAPYF ICPPPFFRPK RPRLPGMLDD EPSDFNNLFK STMPWVGDDM  420
CINDSQALPG LSLVQWMSIQ QNPAPANSFQ SNYVPSMAGL VLQNLPSADT SNQLGFSTSQ  480
ISQSNNLSFD AQKILQTSQQ HDHIQKLPST SPPQQPRNLM SQTLPQSEVH TQLLNPQSLV  540
QTNNILQQQQ SSSQNHQLLR GLSQNPPQQH QVTTMGQNQL QNSIQSPMPD YVNHQLQMSD  600
NQVQLQLLQK LQQQQQTLLA KQSALQQPAQ LIQIPDQQRK LLDVAHNSRA LTPGQVLEIP  660
PTLQNSLPEA RSLTPQITMP SSQKNVQLSN LSKQPGLLSE ISGHVGLPPT ATTNLHSASG  720
CSILTGAGQS VITDDVPSCS TSPSSNNFAN ALPPVISSQI HRRTMVEDDM ALSAVTILSP  780
SVLETMSSNA NMVKDVHSKY EVKPSLNISK HQTQGNFAPK AYLNGGVQTD YLDSSSSATS  840
VFLFQSDTHM HQNNNPLSYN PQSMHCRDNT QNLDVQADSR TNIPYGNHIN GQMEMSPNLD  900
PLLTKGTMGL GKDLPNTISS GGLLGDYENN KDAPELSSSM VSHAFGVLDM SFNSIDSTIN  960
SSSFLNSGPR NPPSLPLPPP LLPPPSQQHQ FQRKRTYTKV YKRGAVGRSV DITRYSGYEE  1020
LKQDLALRFG IEGQLEDRQR IGWKLVYVDH ENDVLLVGDD PWEEFVNCVR CIKILSPQEV  1080
QQMSLDGDFS NGGLPYPAGS SSDGGNT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19220.1	0.0	ARF family protein