PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027339923.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 373aa MW: 41589.5 Da PI: 8.6487

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027339923.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.3	1.7e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l d+++++G g W+t ++ g++R++k+c++rw +yl XP_027339923.1 14 KGPWTPEEDQKLTDYIQKHGHGKWRTLPKNAGLKRCGKSCRLRWANYL 61 79********************************************97 PP
2	Myb_DNA-binding	55	1.9e-17	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr++ eE+e +++++ lG++ W+tIa+ ++ gRt++++k++w+++ XP_027339923.1 67 RGRFSLEEEEAIIQLHSVLGNK-WSTIAANLP-GRTDNEIKNYWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 373 aa Download sequence
MTKPSSNEKN GLKKGPWTPE EDQKLTDYIQ KHGHGKWRTL PKNAGLKRCG KSCRLRWANY 60 LRPDIKRGRF SLEEEEAIIQ LHSVLGNKWS TIAANLPGRT DNEIKNYWNT HIKKKLLKMG 120 IDPVTHTPRL DVIQLASILN SSLYNSPQFN HPGLSGMGRD VNPSQLLSLL TTLLSCQSKN 180 QDVLNHNYQQ NNQIGGTPLL QNQSQCSQPI QLGSIQTFQP NQPQVSIQEN HCTKSNPLHI 240 ETKLEQQISP ITIPFSQQIN ALPNLWQYNG GHNHISDQNQ AESSGTQCFS SPKYNSIINN 300 LLENQILCNN EGVPNFNLSS LLSSTPSSSS PSTLNSSSST TFVNGTTEDE RDTYGSNMLM 360 YNISNGLNNS GLL

Sequence ? help Back to Top

Protein Sequence Length: 373 aa Download sequence

MTKPSSNEKN GLKKGPWTPE EDQKLTDYIQ KHGHGKWRTL PKNAGLKRCG KSCRLRWANY  60
LRPDIKRGRF SLEEEEAIIQ LHSVLGNKWS TIAANLPGRT DNEIKNYWNT HIKKKLLKMG  120
IDPVTHTPRL DVIQLASILN SSLYNSPQFN HPGLSGMGRD VNPSQLLSLL TTLLSCQSKN  180
QDVLNHNYQQ NNQIGGTPLL QNQSQCSQPI QLGSIQTFQP NQPQVSIQEN HCTKSNPLHI  240
ETKLEQQISP ITIPFSQQIN ALPNLWQYNG GHNHISDQNQ AESSGTQCFS SPKYNSIINN  300
LLENQILCNN EGVPNFNLSS LLSSTPSSSS PSTLNSSSST TFVNGTTEDE RDTYGSNMLM  360
YNISNGLNNS GLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21440.1	8e-89	MYB family protein