PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027339958.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 304aa MW: 34272.9 Da PI: 5.0798

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027339958.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52	1.7e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd++l+ +v+++G +W+ +r g+ R++k+c++rw++yl XP_027339958.1 14 KGTWTPEEDKKLIAYVTRYGCWNWRQLPRFAGLARCGKSCRLRWLNYL 61 799***************99**********************97 PP
2	Myb_DNA-binding	59.1	9.7e-19	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++T+eE+e ++++++lG++ W+ Ia +++ gRt++++k++w++ XP_027339958.1 67 RGNFTEEEEETVIKLHEKLGNK-WSIIATHLP-GRTDNEIKNHWHTT 111 89******************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 304 aa Download sequence
MVRTPSSDKS GLKKGTWTPE EDKKLIAYVT RYGCWNWRQL PRFAGLARCG KSCRLRWLNY 60 LRPNIKRGNF TEEEEETVIK LHEKLGNKWS IIATHLPGRT DNEIKNHWHT TLKKRFGKDR 120 GTESNDSESM KQGKDSVQNN DSSPSTSKTS CDPLSPQLSS SQFSSTPSAS TTGATSEIGL 180 NFMDACTEDV NENMWIESCL TEIIGDGNFQ GSDTRGTPDT WELSPPSSSS ENLVMENDHF 240 AFLEATQPTT YCWTQPYVVD LSHVPNELLA PLANESDQQY FSPMYDADLW CPSNSHDLHV 300 SLFP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79180.1	1e-56	MYB family protein