PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027340649.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MIKC_MADS
Protein Properties Length: 241aa    MW: 27793.4 Da    PI: 9.9302
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027340649.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF98.13.5e-312574150
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                    krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+++fss+g+lyey+
  XP_027340649.1 25 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYA 74
                    79***********************************************8 PP
2K-box107.41.7e-35931894100
           K-box   4 ssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                     s+ +s++ea+++ +qqe++kL+++i+ +q+ +Rh+lGe L+sLslkeL++Le +Lek+l+++Rs+K+e l++ +e +qk+e elq++n++Lr+k+
  XP_027340649.1  93 SNAESVSEANTQFYQQESSKLRRQIRDIQNLNRHILGEALGSLSLKELKNLEGRLEKGLSRVRSRKHETLFADVEFMQKREIELQNHNNYLRAKI 187
                     444559****************************************************************************************9 PP

           K-box  99 ee 100
                     +e
  XP_027340649.1 188 AE 189
                     86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MELPNNQAQE GSSQKKMGRG KIEIKRIENT TNRQVTFCKR RNGLLKKAYE LSVLCDAEVA  60
LVVFSSRGRL YEYANNSVRA TIERYKKACA ASSNAESVSE ANTQFYQQES SKLRRQIRDI  120
QNLNRHILGE ALGSLSLKEL KNLEGRLEKG LSRVRSRKHE TLFADVEFMQ KREIELQNHN  180
NYLRAKIAEH ERAQQQQQNM MSGTLCESLP SQPYDRNFFP VNLIGPDHQY SRQDQTALQL  240
V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58780.11e-114MIKC_MADS family protein