PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027340803.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family C2H2
Protein Properties Length: 238aa    MW: 25577.6 Da    PI: 6.9538
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027340803.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.30.0002587109123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++C + F ++  L  H++ H
  XP_027340803.1  87 FSCNYCRRKFYSSQALGGHQNAH 109
                     89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MMTPNLNLEP ENHSEGTSQV ASPDLTKGST TTSSSLSKDE ADPAPVTLDL TLNLNSNSDC  60
ELKGSSDASS EVGAEVHASA SATPRVFSCN YCRRKFYSSQ ALGGHQNAHK RERTMAKRAM  120
RMGMFTERYT SLASLPLHGS PFRSLGLEAH AAMHRRQVPS SLMVPDMKAG AKFEKNNFGS  180
LVFMDDDDVG FFWPGSFRQV DQGAGVNLGH AQSSNASLVP MPPPSPQAST SPDLTLKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66140.11e-41C2H2 family protein