PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027340806.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 474aa MW: 53144.2 Da PI: 4.7879

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027340806.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.3	0.00012	55	76	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C++Cgk+F++ L H r+H XP_027340806.1 55 ECNICGKTFRNGKALGGHRRSH 76 5*******************99 PP
2	zf-C2H2	15.3	5.9e-05	126	148	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C C+k F++k +L H+++H XP_027340806.1 126 FTCFLCKKEFPSKNSLFGHMKSH 148 89********************9 PP
3	zf-C2H2	14.9	7.6e-05	385	407	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC+ CgksFs+ L H + H XP_027340806.1 385 YKCGTCGKSFSTFQGLGGHRSIH 407 9***********99998888777 PP

Sequence ? help Back to Top
Protein Sequence Length: 474 aa Download sequence
MDSDKERQEV SDHEEESYEN EEKMKGSQLG SFKDEAESMM VDEVALYNSA PGPRECNICG 60 KTFRNGKALG GHRRSHFQAL RKNQRKVKAR FPNQNSRIGD INNRAICDYD DDDDVNDDPF 120 MCDGKFTCFL CKKEFPSKNS LFGHMKSHPE RSWRGVFPPT HHPHKHSSSS HNSDSMENHN 180 EDEEDDDFVP NVAVLALDEE HVVLDLLQFT SPSWLTKDKR GRRCIGGYAA AETLAFIYSY 240 AKLYRGESSN NKAGVEQNTP EVPTPQVPWK CNKSMIGESS TSGKPAGKKI KIYFSEMQVE 300 NKVEESDDCD DSDMVDGDDD EEDVMNENVD AEETLGRVQD HAGHFGESKL KKVEKGKNIE 360 NLALNKSKAR DSEYVNEGQE NLGGYKCGTC GKSFSTFQGL GGHRSIHKEK NIATMNASKA 420 SEAVAEENHS RSTSNMNKMD EASLNEETEA DEACQSSGAK KMNFDLNEPY AMED

Sequence ? help Back to Top

Protein Sequence Length: 474 aa Download sequence

MDSDKERQEV SDHEEESYEN EEKMKGSQLG SFKDEAESMM VDEVALYNSA PGPRECNICG  60
KTFRNGKALG GHRRSHFQAL RKNQRKVKAR FPNQNSRIGD INNRAICDYD DDDDVNDDPF  120
MCDGKFTCFL CKKEFPSKNS LFGHMKSHPE RSWRGVFPPT HHPHKHSSSS HNSDSMENHN  180
EDEEDDDFVP NVAVLALDEE HVVLDLLQFT SPSWLTKDKR GRRCIGGYAA AETLAFIYSY  240
AKLYRGESSN NKAGVEQNTP EVPTPQVPWK CNKSMIGESS TSGKPAGKKI KIYFSEMQVE  300
NKVEESDDCD DSDMVDGDDD EEDVMNENVD AEETLGRVQD HAGHFGESKL KKVEKGKNIE  360
NLALNKSKAR DSEYVNEGQE NLGGYKCGTC GKSFSTFQGL GGHRSIHKEK NIATMNASKA  420
SEAVAEENHS RSTSNMNKMD EASLNEETEA DEACQSSGAK KMNFDLNEPY AMED

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26940.1	6e-14	C2H2 family protein