PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027340923.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family NF-YC
Protein Properties Length: 266aa    MW: 29923.9 Da    PI: 6.3427
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027340923.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC175.26.6e-55821861102
           NF-YC   1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdfl 92 
                     ql++fw++q   ie++ dfknh+lPlarikki+kadedv+misaeaPv+++kace+fileltlrsw+h+eenkrrtl+k+diaaa++r d+fdfl
  XP_027340923.1  82 QLQVFWSNQmqeIEQTIDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRNDVFDFL 176
                     89******988889********************************************************************************* PP

           NF-YC  93 vdivprdelk 102
                     vdi+prdelk
  XP_027340923.1 177 VDIIPRDELK 186
                     *******975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MDKSEQSQQQ QQQHVMGVAP GASQMAYSSH YQTASMMASG APAVAVPSPT QPPAAFSSSA  60
HQLAYQQAQH FHHQQQQHQQ QQLQVFWSNQ MQEIEQTIDF KNHSLPLARI KKIMKADEDV  120
RMISAEAPVI FAKACEMFIL ELTLRSWIHT EENKRRTLQK NDIAAAISRN DVFDFLVDII  180
PRDELKEEGL GITKATIPIV GSPADMPYYY VPPQHPVGPP GMIMGKPIDQ AALYSTQQPR  240
PPMAFMPWPP TQPQQEQPSQ QQQTDS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1155161RRTLQKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G56170.16e-80NF-YC family protein