PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027340925.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family NF-YC
Protein Properties Length: 234aa    MW: 26759.3 Da    PI: 6.2297
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027340925.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC175.64.9e-55501541102
           NF-YC   1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdfl 92 
                     ql++fw++q   ie++ dfknh+lPlarikki+kadedv+misaeaPv+++kace+fileltlrsw+h+eenkrrtl+k+diaaa++r d+fdfl
  XP_027340925.1  50 QLQVFWSNQmqeIEQTIDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRNDVFDFL 144
                     89******988889********************************************************************************* PP

           NF-YC  93 vdivprdelk 102
                     vdi+prdelk
  XP_027340925.1 145 VDIIPRDELK 154
                     *******975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MDKSEQSQQQ QQQHVMGVAP PAAFSSSAHQ LAYQQAQHFH HQQQQHQQQQ LQVFWSNQMQ  60
EIEQTIDFKN HSLPLARIKK IMKADEDVRM ISAEAPVIFA KACEMFILEL TLRSWIHTEE  120
NKRRTLQKND IAAAISRNDV FDFLVDIIPR DELKEEGLGI TKATIPIVGS PADMPYYYVP  180
PQHPVGPPGM IMGKPIDQAA LYSTQQPRPP MAFMPWPPTQ PQQEQPSQQQ QTDS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1123129RRTLQKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G56170.13e-80NF-YC family protein