PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027340932.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 378aa MW: 42922.6 Da PI: 4.612

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027340932.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48	2.9e-15	16	63	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W++ Ed++l+ ++++G ++W++ ++ g+ R++k+c++rw +yl XP_027340932.1 16 RGPWSPAEDLKLIAFIQKFGHENWRALPKQAGLLRCGKSCRLRWINYL 63 89****************************99**********97 PP
2	Myb_DNA-binding	55.3	1.5e-17	69	114	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eE+e +++++k lG++ W++Ia++++ gRt++++k+ w+++l XP_027340932.1 69 RGNFTPEEEETIIRLHKALGNK-WSKIASRLP-GRTDNEIKNVWNTHL 114 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 378 aa Download sequence
MGKGRAPCCD KTQVKRGPWS PAEDLKLIAF IQKFGHENWR ALPKQAGLLR CGKSCRLRWI 60 NYLRPDVKRG NFTPEEEETI IRLHKALGNK WSKIASRLPG RTDNEIKNVW NTHLKKRLVA 120 KKSSESSGDE SKTESSITSS SSSSSSESFF SNERPNQAKT PTSGNVFNDQ ASQETMTDKI 180 EHDSEKQVSN EVIDIITTED PKESSVSLSS VESNILNSSQ IVAYNKPEPQ LASPLLTYVG 240 PYDVDSTLEE VDKPNHLIEI PWESDYDFWK LLDENLGSFQ SNEVQLGEFQ ASQNMILEEV 300 SVHDDEAKKW SQDLENEFGV VGEIKESNKD PFPPKNYAVE PEMDHPQTFD FDDMTRPESE 360 LDFGYIQLWP SWPQNTTL

Sequence ? help Back to Top

Protein Sequence Length: 378 aa Download sequence

MGKGRAPCCD KTQVKRGPWS PAEDLKLIAF IQKFGHENWR ALPKQAGLLR CGKSCRLRWI  60
NYLRPDVKRG NFTPEEEETI IRLHKALGNK WSKIASRLPG RTDNEIKNVW NTHLKKRLVA  120
KKSSESSGDE SKTESSITSS SSSSSSESFF SNERPNQAKT PTSGNVFNDQ ASQETMTDKI  180
EHDSEKQVSN EVIDIITTED PKESSVSLSS VESNILNSSQ IVAYNKPEPQ LASPLLTYVG  240
PYDVDSTLEE VDKPNHLIEI PWESDYDFWK LLDENLGSFQ SNEVQLGEFQ ASQNMILEEV  300
SVHDDEAKKW SQDLENEFGV VGEIKESNKD PFPPKNYAVE PEMDHPQTFD FDDMTRPESE  360
LDFGYIQLWP SWPQNTTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79180.1	1e-76	MYB family protein