PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027341166.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

WOX

Protein Properties

Length: 359aa MW: 40907.7 Da PI: 8.3495

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027341166.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	69.6	3.7e-22	82	141	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eql++Leel+++ +r+psae++++++++l +++ ++V++WFqN++a+e++ XP_027341166.1 82 SRWNPTPEQLRALEELYRRgTRTPSAEQIQQITAQLrrfgKIEGKNVFYWFQNHKARERQ 141 7***************99************************************97 PP
2	Wus_type_Homeobox	114.7	4.6e-37	81	143	3	65
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++RW+PtpeQ++ Leely++G+rtP++e+iq+ita+L+++Gkie+kNVfyWFQN+kaRerqk+ XP_027341166.1 81 SSRWNPTPEQLRALEELYRRGTRTPSAEQIQQITAQLRRFGKIEGKNVFYWFQNHKARERQKR 143 79***********************************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
MWMVGYNEGG EFNMADYAFN GRKLRPLMPR PVTSPNNTST TNTPCLSRIH HGNDFFSQYH 60 NLASVAEQGK REFNTPPVVV SSRWNPTPEQ LRALEELYRR GTRTPSAEQI QQITAQLRRF 120 GKIEGKNVFY WFQNHKARER QKRRRQMESA AEGHHTRDFD STLEKKDLGA SRTVFEVEQT 180 KNWAPSTNCS TLAEESVSIQ RAAKAAVADS RTDGWLQFDE GELQQRRNFM ERNATWHMMQ 240 LSCPSPPTVT PHLINTPPII STTSMATTTT VTARVMDPKL IKNHDLSFFI SPHRENGIIH 300 LSSINTQDAN CVESQTLQLF PTRNGDESSD NINQQKETDT SVSAMNAPSQ FFEFLPLKN

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

MWMVGYNEGG EFNMADYAFN GRKLRPLMPR PVTSPNNTST TNTPCLSRIH HGNDFFSQYH  60
NLASVAEQGK REFNTPPVVV SSRWNPTPEQ LRALEELYRR GTRTPSAEQI QQITAQLRRF  120
GKIEGKNVFY WFQNHKARER QKRRRQMESA AEGHHTRDFD STLEKKDLGA SRTVFEVEQT  180
KNWAPSTNCS TLAEESVSIQ RAAKAAVADS RTDGWLQFDE GELQQRRNFM ERNATWHMMQ  240
LSCPSPPTVT PHLINTPPII STTSMATTTT VTARVMDPKL IKNHDLSFFI SPHRENGIIH  300
LSSINTQDAN CVESQTLQLF PTRNGDESSD NINQQKETDT SVSAMNAPSQ FFEFLPLKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18010.1	3e-64	WOX family protein