PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027341335.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MYB
Protein Properties Length: 255aa    MW: 29136.8 Da    PI: 6.7843
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027341335.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding45.91.3e-14862148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.......TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.......kgRtlkqcksrwqkyl 48
                     +g+WT++Ed++lv  v +lG ++W+  a+  g       ++Rt+k+c++rw +yl
   XP_027341335.1  8 KGPWTEQEDLKLVSFVGLLGDRRWDFLAKVSGlkvegdsLNRTGKSCRLRWVNYL 62
                     79***************************************************97 PP
2Myb_DNA-binding56.37.4e-1868113148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T++E+ l +d+++++G++ W++Iar+++ gRt++++k++w++++
   XP_027341335.1  68 RGKMTPQEERLVLDLHAKWGNR-WSRIARKLP-GRTDNEIKNYWRTLM 113
                      89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MVQQEVRKGP WTEQEDLKLV SFVGLLGDRR WDFLAKVSGL KVEGDSLNRT GKSCRLRWVN  60
YLHPGLKRGK MTPQEERLVL DLHAKWGNRW SRIARKLPGR TDNEIKNYWR TLMRKKAQDK  120
KRGEASSVHS SSESSNNHAV DSHASKKAGE ESFYDTGGPC LIGSTQVKIG EVQQGFITMD  180
DIWKDIDMSE EKILQPVYDG HSEEGCNFSC PRVPSPSSWE YSSDPLWVMD EESMFFPMND  240
PYFSCYAQDS AFLTG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46130.11e-87MYB family protein