PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027341477.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MYB
Protein Properties Length: 315aa    MW: 36193.3 Da    PI: 7.6974
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027341477.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding57.72.8e-181966148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT eEd ll++++  +G g+W++ a++ g++Rt+k+c++rw++yl
   XP_027341477.1 19 RGPWTLEEDNLLAQYISNHGEGRWNLLAKRSGLKRTGKSCRLRWLNYL 66
                     89********************************************97 PP
2Myb_DNA-binding52.61.1e-1672115146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+ T++E++l+++++ ++G++ W++Ia++++ gRt++++k++w++
   XP_027341477.1  72 RGNLTPQEQLLILELHSKWGNR-WSKIAQHLP-GRTDNEIKNYWRT 115
                      7999******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MSTSKSISSS SEDDNELRRG PWTLEEDNLL AQYISNHGEG RWNLLAKRSG LKRTGKSCRL  60
RWLNYLKPDV KRGNLTPQEQ LLILELHSKW GNRWSKIAQH LPGRTDNEIK NYWRTRIQKQ  120
ARHLRIETDS TEFQELVRHF WVPRLLQKAR ESSSSAMSIH NQPIPLPLDG VSQHLTVGTI  180
PTQAPMQGPC MNEAGSTYLD QHEHNSDSEH NNGSCISLSE SANIPKVHQD LGYTTRQFHA  240
LNNNNNFGTY TYDGYHVNNN AYEIDTFKIA TPRVTEHVQY PVGDCQMAGS NWVNNGFACS  300
MWNMDELWQF SNLQK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25340.12e-80MYB family protein