PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027341538.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

YABBY

Protein Properties

Length: 180aa MW: 20224.9 Da PI: 8.7008

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027341538.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	218.8	1.7e-67	6	156	5	170
YABBY 5 ssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsse 99 ++e+vCyv+CnfCnt lavsvP +sl+++vtvrCGhC++llsvn+ + q+ ++++ ++++++l +e++ k+ ++++++ s+ XP_027341538.1 6 MATERVCYVHCNFCNTTLAVSVPCSSLLTIVTVRCGHCANLLSVNMGASLQTFPSQDP------QRQHQHLSIQESSSKELGSSSKCK-----SF 89 579**************************************************996......344555555555544444433333.....32 PP YABBY 100 klsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 e d+e pr+pp irPPekrqrvPsaynrfikeeiqrikasnPdishreafs+aaknWahfP+ihfgl XP_027341538.1 90 ---EPVDHEQPRIPP-IRPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGL 156 ...345678899999.9**************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 180 aa Download sequence
MSMDMMATER VCYVHCNFCN TTLAVSVPCS SLLTIVTVRC GHCANLLSVN MGASLQTFPS 60 QDPQRQHQHL SIQESSSKEL GSSSKCKSFE PVDHEQPRIP PIRPPEKRQR VPSAYNRFIK 120 EEIQRIKASN PDISHREAFS TAAKNWAHFP HIHFGLKLDG NKQAKLDQQG DGTQKSNGFY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08465.1	2e-71	YABBY family protein