PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027341659.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 629aa MW: 70293.4 Da PI: 6.5217

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027341659.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	45.8	1.1e-14	431	477	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +h ErrRR+++N++f +Lr+++P+ + K +K++iL A+eY+k+L+ XP_027341659.1 431 NHVLSERRRRAKLNERFLTLRSMVPSiS------KDDKVSILDDAIEYLKKLE 477 78999*******************66......**************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 629 aa Download sequence
MVPDNMKKQL ALAVRSIQWS YAIFWTDSTT QPGVLSWGEG YYNGDIKTRK TSQGVELNSD 60 QMGLQRSEQL RELFKSLKTA ETNPQTKRPS AALSPEDLTD AEWYYLVCMS FVFNIGQGLP 120 GRTLAKGQPI WLNNADSSDC RVFSRSLLAK SASIQTVVCF PFLEGVIELG TSDQVSEDLS 180 LIQRIRTSFL NTLCVNVPNK SGATLKSRNE EDVACVAFDH NAYNVESIPE VGYGIINTTS 240 PNGSSNALQA NQPPDETFTV EKITSGTSQV QSWQVMDDEL SNCVHNSMNS SDCISQTLAS 300 PKKIASALKG DNPSAPCARD LQKCSNTKMT VVDPLSDDWH YQRVLSSLLK GSDQLLMGTH 360 FQNIHQESSF VSWRKEGAMN CQWPRAGTSQ NLLKKVLFEV PRMHLDGLLE SQEENDYKEG 420 MRLEADEIGM NHVLSERRRR AKLNERFLTL RSMVPSISKD DKVSILDDAI EYLKKLEKRI 480 EELEAQRGVK DIESGTKRSP QDMMERTSDH YYNKTNNGKK AVVKKRKACG IEETVREINS 540 DTLRGSSTND VAVFTSNNEI VIEMKCPSRA GRLMEIMEAV NSLNIDFNSV QSTEADGNLY 600 LTIKSVFTGP TIATAKRIKQ TLQKVAFKC

Sequence ? help Back to Top

Protein Sequence Length: 629 aa Download sequence

MVPDNMKKQL ALAVRSIQWS YAIFWTDSTT QPGVLSWGEG YYNGDIKTRK TSQGVELNSD  60
QMGLQRSEQL RELFKSLKTA ETNPQTKRPS AALSPEDLTD AEWYYLVCMS FVFNIGQGLP  120
GRTLAKGQPI WLNNADSSDC RVFSRSLLAK SASIQTVVCF PFLEGVIELG TSDQVSEDLS  180
LIQRIRTSFL NTLCVNVPNK SGATLKSRNE EDVACVAFDH NAYNVESIPE VGYGIINTTS  240
PNGSSNALQA NQPPDETFTV EKITSGTSQV QSWQVMDDEL SNCVHNSMNS SDCISQTLAS  300
PKKIASALKG DNPSAPCARD LQKCSNTKMT VVDPLSDDWH YQRVLSSLLK GSDQLLMGTH  360
FQNIHQESSF VSWRKEGAMN CQWPRAGTSQ NLLKKVLFEV PRMHLDGLLE SQEENDYKEG  420
MRLEADEIGM NHVLSERRRR AKLNERFLTL RSMVPSISKD DKVSILDDAI EYLKKLEKRI  480
EELEAQRGVK DIESGTKRSP QDMMERTSDH YYNKTNNGKK AVVKKRKACG IEETVREINS  540
DTLRGSSTND VAVFTSNNEI VIEMKCPSRA GRLMEIMEAV NSLNIDFNSV QSTEADGNLY  600
LTIKSVFTGP TIATAKRIKQ TLQKVAFKC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	437	478	RRRRAKLNERFLTLRSMVPSISKDDKVSILDDAIEYLKKLEK
2	496	503	TKRSPQDM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41315.1	1e-173	bHLH family protein