PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027341811.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

Trihelix

Protein Properties

Length: 449aa MW: 50988.1 Da PI: 5.8056

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027341811.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	70.8	2.6e-22	119	215	1	85
trihelix 1 rWtkqevlaLiearremeerlrrgk...........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrt.sessstcpyfd 83 +Wt+++v++Li++++ ++++ g +kk++W+ vsk m +g+++sp+qC++k+++lnkryk+++++ +++t ++++++ ++ d XP_027341811.1 119 KWTDNMVRLLIAVVSCVGDDGTIGGmdglkrksgflQKKGKWKTVSKIMIGKGCHVSPQQCEDKFNDLNKRYKRLNDILGRGTcCQVVENPALMD 213 7************888888876555566667788********************************************7578888888877 PP trihelix 84 ql 85 ++ XP_027341811.1 214 SM 215 77 PP

Sequence ? help Back to Top
Protein Sequence Length: 449 aa Download sequence
MNSSGLGGGF LSGPSGGILD LESPFHRHQQ TQLGHPSVTG QQHMNIMSGL EKDHPIGLIE 60 VKSLNASLNF GKGKAIAPSN PANSNDLSED DEPSYTEDGN CENLDGGKGK KGSPWQRMKW 120 TDNMVRLLIA VVSCVGDDGT IGGMDGLKRK SGFLQKKGKW KTVSKIMIGK GCHVSPQQCE 180 DKFNDLNKRY KRLNDILGRG TCCQVVENPA LMDSMPNLSA KAKDDVRKIL SSKHLFYKEM 240 CAYHNGQRIP NCHDLDLQGY SMEHGRDSRE NNGSEDEDED NNESEDDELE DEININAHED 300 GGRMEELCDR NKLSEEDGHF GPQSVRMDKF EVEMARVFQD PTKSSYERRE WIKIQMLQLQ 360 EQNIGYQAQA LELEKQRFKW LRYCSKKDRE LERLRLENKR MKLENERWIL KLKQKELETD 420 FSTSDMSLDP APLGNQPQGR EHINLGRQQ

Sequence ? help Back to Top

Protein Sequence Length: 449 aa Download sequence

MNSSGLGGGF LSGPSGGILD LESPFHRHQQ TQLGHPSVTG QQHMNIMSGL EKDHPIGLIE  60
VKSLNASLNF GKGKAIAPSN PANSNDLSED DEPSYTEDGN CENLDGGKGK KGSPWQRMKW  120
TDNMVRLLIA VVSCVGDDGT IGGMDGLKRK SGFLQKKGKW KTVSKIMIGK GCHVSPQQCE  180
DKFNDLNKRY KRLNDILGRG TCCQVVENPA LMDSMPNLSA KAKDDVRKIL SSKHLFYKEM  240
CAYHNGQRIP NCHDLDLQGY SMEHGRDSRE NNGSEDEDED NNESEDDELE DEININAHED  300
GGRMEELCDR NKLSEEDGHF GPQSVRMDKF EVEMARVFQD PTKSSYERRE WIKIQMLQLQ  360
EQNIGYQAQA LELEKQRFKW LRYCSKKDRE LERLRLENKR MKLENERWIL KLKQKELETD  420
FSTSDMSLDP APLGNQPQGR EHINLGRQQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21200.1	1e-80	Trihelix family protein