PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027341871.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MIKC_MADS

Protein Properties

Length: 199aa MW: 22425.2 Da PI: 9.5221

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027341871.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	87.9	5.6e-28	9	58	1	50
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krie+ks rqvtfskRrng++KKA ELS+LCda+va++ifsstgkl+e + XP_027341871.1 9 KRIEDKSTRQVTFSKRRNGLMKKARELSILCDAKVALVIFSSTGKLFELC 58 79********************************************9965 PP
2	K-box	41.3	6.4e-15	112	167	44	99
K-box 44 esLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 e Ls+ eL++Le+ ++++l++iRs K +l++e++ +l+kke+ l++en+ L+k+++ XP_027341871.1 112 EHLSVTELMELEKLIHTALSQIRSAKVRLMIESVVNLKKKEHILSKENELLEKQIA 167 689**************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 199 aa Download sequence
MGKKKVEMKR IEDKSTRQVT FSKRRNGLMK KARELSILCD AKVALVIFSS TGKLFELCNG 60 DSLTKVLQRY WDCLEASDAA SKPELLFEIA DIWSGAAFSQ LVKRHFGVSE PEHLSVTELM 120 ELEKLIHTAL SQIRSAKVRL MIESVVNLKK KEHILSKENE LLEKQIAAQE KASDIDKAIT 180 RSMEGAKTDP VVHNLFPGL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65050.2	3e-41	MIKC_MADS family protein