PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027342055.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 421aa MW: 46870.8 Da PI: 8.6826

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027342055.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18.7	4.9e-06	57	79	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C++C++ F r nL+ H r+H XP_027342055.1 57 YVCEICNQGFQRDQNLQMHRRRH 79 9*********************9 PP
2	zf-C2H2	14.6	9.6e-05	134	156	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+k + +s++k H++t+ XP_027342055.1 134 WVCERCSKGYAVQSDYKAHLKTC 156 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 421 aa Download sequence
MLANNSSPSL VPTSEPFSCA ENGTSTNKRK RRPAGTPDPD AEVVSLSPKT LLESDRYVCE 60 ICNQGFQRDQ NLQMHRRRHK VPWKLLKRET PVVKKRVFVC PEPTCLHHDP CHALGDLVGI 120 KKHFRRKHSN HKQWVCERCS KGYAVQSDYK AHLKTCGTRG HSCDCGRVFS RVESFIEHQD 180 ACNMGRSTQP ETQAAATACL SRTASSPSSD TNFSTGGPWP MGVIIPKHTV IETTLSNNNL 240 YPNLELQLST TTTSNPIDVI SVASPKAKRE GNRSTQLQLS IGSSEIIVNE KNESSPNSEK 300 SLGESVKEQA REQLRIAMAE KAYAEEARKQ AKKQIELAEL EFTNAKRIRQ QAQTELDKAY 360 GLKEHAIKQI NSTMLQITCH ACKQEFQSRT TTASPDDNSL VLSYITTEGG EVENHVKNAN 420 S

Sequence ? help Back to Top

Protein Sequence Length: 421 aa Download sequence

MLANNSSPSL VPTSEPFSCA ENGTSTNKRK RRPAGTPDPD AEVVSLSPKT LLESDRYVCE  60
ICNQGFQRDQ NLQMHRRRHK VPWKLLKRET PVVKKRVFVC PEPTCLHHDP CHALGDLVGI  120
KKHFRRKHSN HKQWVCERCS KGYAVQSDYK AHLKTCGTRG HSCDCGRVFS RVESFIEHQD  180
ACNMGRSTQP ETQAAATACL SRTASSPSSD TNFSTGGPWP MGVIIPKHTV IETTLSNNNL  240
YPNLELQLST TTTSNPIDVI SVASPKAKRE GNRSTQLQLS IGSSEIIVNE KNESSPNSEK  300
SLGESVKEQA REQLRIAMAE KAYAEEARKQ AKKQIELAEL EFTNAKRIRQ QAQTELDKAY  360
GLKEHAIKQI NSTMLQITCH ACKQEFQSRT TTASPDDNSL VLSYITTEGG EVENHVKNAN  420
S

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	28	33	KRKRRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01940.1	1e-156	C2H2 family protein