PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027342116.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

Trihelix

Protein Properties

Length: 404aa MW: 45951.1 Da PI: 4.6197

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027342116.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	48.5	2.2e-15	174	258	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmre.rgferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 Wt+qe+ +L++a ++ + +r++l+ W+ev++k++e ++e++ +qC+++++ l+k ykk+k ++ ++ s+++yf++++ XP_027342116.1 174 WTEQETFVLLDAWGDRFLQHGRKSLRSEEWQEVAEKVSEvSKIEKTDTQCRNRLDTLKKTYKKEKVKFPEG-DGGASKWVYFKRMD 258 ***********************************762678**********************99.66677******8 PP

Sequence ? help Back to Top
Protein Sequence Length: 404 aa Download sequence
MEGIEDGARA RYPSNSSYGI SHHPGYGYLN QQKLPIRNSP YSHSVANEYG RANNNNEEGE 60 DDDQEQLGGD DDDVDQRNTV QLSQKDADDN DGEEDEMVGH GNENDDNNNN DGDDEDDTKQ 120 KSYVMKTEDD LEWHPKKQKL KSLISAYELA PRVPAPSASA PKPSFGGRNS LTDWTEQETF 180 VLLDAWGDRF LQHGRKSLRS EEWQEVAEKV SEVSKIEKTD TQCRNRLDTL KKTYKKEKVK 240 FPEGDGGASK WVYFKRMDRL MSSPPQQAGL SCGLDSGEYV FMNPGVYLNR ANGLDEMRDS 300 PENTESTGEE GSDDGPQAKK RRKGRGNDGV SSFRLLAGSI QKFSKIYEKI ENSKRQQMVE 360 LEKMRMGFYK ELETQKRQIL ERLQSEISKL EQRDNEKDDS AENL

Sequence ? help Back to Top

Protein Sequence Length: 404 aa Download sequence

MEGIEDGARA RYPSNSSYGI SHHPGYGYLN QQKLPIRNSP YSHSVANEYG RANNNNEEGE  60
DDDQEQLGGD DDDVDQRNTV QLSQKDADDN DGEEDEMVGH GNENDDNNNN DGDDEDDTKQ  120
KSYVMKTEDD LEWHPKKQKL KSLISAYELA PRVPAPSASA PKPSFGGRNS LTDWTEQETF  180
VLLDAWGDRF LQHGRKSLRS EEWQEVAEKV SEVSKIEKTD TQCRNRLDTL KKTYKKEKVK  240
FPEGDGGASK WVYFKRMDRL MSSPPQQAGL SCGLDSGEYV FMNPGVYLNR ANGLDEMRDS  300
PENTESTGEE GSDDGPQAKK RRKGRGNDGV SSFRLLAGSI QKFSKIYEKI ENSKRQQMVE  360
LEKMRMGFYK ELETQKRQIL ERLQSEISKL EQRDNEKDDS AENL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	318	324	AKKRRKG
2	319	323	KKRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24490.1	6e-67	Trihelix family protein