PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027342163.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 404aa MW: 46695.1 Da PI: 8.4929

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027342163.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	19.3	3e-06	64	85	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C+ Cg +F+ + +L +H+r+H XP_027342163.1 64 TCEECGATFKKHAYLLQHMRSH 85 6********************9 PP
2	zf-C2H2	19.3	3e-06	135	159	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+C+ dC s++rk++L+rH+ +H XP_027342163.1 135 YVCTvnDCQASYRRKDHLTRHLLLH 159 99********************998 PP
3	zf-C2H2	13.9	0.00017	164	189	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 +kCp +C+ F+ + n+krH + H XP_027342163.1 164 FKCPidNCNLEFTVQGNMKRHVNEiH 189 89*******************99888 PP
4	zf-C2H2	16.9	1.8e-05	204	228	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y Cp Cgk+F+ s L++H +H XP_027342163.1 204 YLCPeiGCGKVFRFASKLQKHEDSH 228 569999***************9888 PP

Sequence ? help Back to Top
Protein Sequence Length: 404 aa Download sequence
MGEAMESEEI PKYRDIRRYF CKYCGICRSK KTIITSHINS HHKEEVEKER EEKDPEAGAV 60 KSNTCEECGA TFKKHAYLLQ HMRSHSLEHW IPDKELQNAR GSVFPLDGSV SGWETSCEAP 120 SRMPRSRTVQ NERPYVCTVN DCQASYRRKD HLTRHLLLHQ GKTFKCPIDN CNLEFTVQGN 180 MKRHVNEIHD DSSINASVKS EQQYLCPEIG CGKVFRFASK LQKHEDSHVK LESVDVVCLE 240 PGCMKHFTNA QCLKAHVKSC HQYVTCDTCG TKQLKKNIKR HLCSHEANSS SETFHCEFKG 300 CVCTFSKKSN LDKHKKAVHF KEKPFVCGFP DCGMRFAYKH VRDNHEKTGK HVFTLGDFER 360 ADEQFRSRSR GGRKRICPTV EMLVRKRVTP PSQLEDWLFM QDSE

Sequence ? help Back to Top

Protein Sequence Length: 404 aa Download sequence

MGEAMESEEI PKYRDIRRYF CKYCGICRSK KTIITSHINS HHKEEVEKER EEKDPEAGAV  60
KSNTCEECGA TFKKHAYLLQ HMRSHSLEHW IPDKELQNAR GSVFPLDGSV SGWETSCEAP  120
SRMPRSRTVQ NERPYVCTVN DCQASYRRKD HLTRHLLLHQ GKTFKCPIDN CNLEFTVQGN  180
MKRHVNEIHD DSSINASVKS EQQYLCPEIG CGKVFRFASK LQKHEDSHVK LESVDVVCLE  240
PGCMKHFTNA QCLKAHVKSC HQYVTCDTCG TKQLKKNIKR HLCSHEANSS SETFHCEFKG  300
CVCTFSKKSN LDKHKKAVHF KEKPFVCGFP DCGMRFAYKH VRDNHEKTGK HVFTLGDFER  360
ADEQFRSRSR GGRKRICPTV EMLVRKRVTP PSQLEDWLFM QDSE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72050.2	1e-125	C2H2 family protein