PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027342164.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 360aa MW: 41756.7 Da PI: 8.5868

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027342164.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	19.5	2.6e-06	64	85	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C+ Cg +F+ + +L +H+r+H XP_027342164.1 64 TCEECGATFKKHAYLLQHMRSH 85 6********************9 PP
2	zf-C2H2	19.5	2.6e-06	91	115	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y+C+ dC s++rk++L+rH+ +H XP_027342164.1 91 YVCTvnDCQASYRRKDHLTRHLLLH 115 99********************998 PP
3	zf-C2H2	14.1	0.00014	120	145	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 +kCp +C+ F+ + n+krH + H XP_027342164.1 120 FKCPidNCNLEFTVQGNMKRHVNEiH 145 89*******************99888 PP
4	zf-C2H2	17	1.6e-05	160	184	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y Cp Cgk+F+ s L++H +H XP_027342164.1 160 YLCPeiGCGKVFRFASKLQKHEDSH 184 569999***************9888 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MGEAMESEEI PKYRDIRRYF CKYCGICRSK KTIITSHINS HHKEEVEKER EEKDPEAGAV 60 KSNTCEECGA TFKKHAYLLQ HMRSHSLERP YVCTVNDCQA SYRRKDHLTR HLLLHQGKTF 120 KCPIDNCNLE FTVQGNMKRH VNEIHDDSSI NASVKSEQQY LCPEIGCGKV FRFASKLQKH 180 EDSHVKLESV DVVCLEPGCM KHFTNAQCLK AHVKSCHQYV TCDTCGTKQL KKNIKRHLCS 240 HEANSSSETF HCEFKGCVCT FSKKSNLDKH KKAVHFKEKP FVCGFPDCGM RFAYKHVRDN 300 HEKTGKHVFT LGDFERADEQ FRSRSRGGRK RICPTVEMLV RKRVTPPSQL EDWLFMQDSE

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MGEAMESEEI PKYRDIRRYF CKYCGICRSK KTIITSHINS HHKEEVEKER EEKDPEAGAV  60
KSNTCEECGA TFKKHAYLLQ HMRSHSLERP YVCTVNDCQA SYRRKDHLTR HLLLHQGKTF  120
KCPIDNCNLE FTVQGNMKRH VNEIHDDSSI NASVKSEQQY LCPEIGCGKV FRFASKLQKH  180
EDSHVKLESV DVVCLEPGCM KHFTNAQCLK AHVKSCHQYV TCDTCGTKQL KKNIKRHLCS  240
HEANSSSETF HCEFKGCVCT FSKKSNLDKH KKAVHFKEKP FVCGFPDCGM RFAYKHVRDN  300
HEKTGKHVFT LGDFERADEQ FRSRSRGGRK RICPTVEMLV RKRVTPPSQL EDWLFMQDSE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72050.2	1e-134	C2H2 family protein