PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027342284.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

SBP

Protein Properties

Length: 177aa MW: 20193.7 Da PI: 9.7326

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027342284.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	129.7	1.1e-40	54	130	1	77
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 +Cq+e+C++dl +ak+yhrrhkvCe h+ka+vv+v+g++qrfCqqCsrfhel efD++krsCrrrLa+hnerrrk++ XP_027342284.1 54 CCQAEKCNVDLHDAKQYHRRHKVCEYHAKAQVVIVAGIRQRFCQQCSRFHELAEFDDKKRSCRRRLAGHNERRRKNS 130 6**************************************************************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 177 aa Download sequence
MDKVKREGME DCVHSQNGYL ELEEDKKKKG VLAMGRKKGS ASAGGGSSGN SMRCCQAEKC 60 NVDLHDAKQY HRRHKVCEYH AKAQVVIVAG IRQRFCQQCS RFHELAEFDD KKRSCRRRLA 120 GHNERRRKNS DQSQTEGSNL QGTSPHLKDI ACGHANDRGR IHITNQENDA YKHFQIR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	111	128	KKRSCRRRLAGHNERRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15270.1	4e-43	SBP family protein