PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027342541.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB_related

Protein Properties

Length: 692aa MW: 76722.9 Da PI: 8.6131

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027342541.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.8	2.2e-07	593	642	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 r +++ E e lv+av++lG+g+W+ + k+Rt ++k++w ++ XP_027342541.1 593 RRPFSVAEVEALVQAVEKLGTGRWRDVKLQAFdnaKHRTYVDLKDKWKTL 642 6789999*****************8877779************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 692 aa Download sequence
MVVQKRLDYS FNGNEVPTKP RTPRSARGRA TFQRRLEDNQ MCAFDLLATI AGNLLQEKQN 60 PSASSDRSSE KDRHGFVKEE CQDANKPSRA ELSDEGSSDR KCFSNLSSQA YDQNCSVKEL 120 PRCEIDGHSC IASIVTSSSC SERFVAETLV DGKSQNGMEN FAGKVELGSF GCPENSGCKL 180 DSDVSKVKDE LHKFEKVPID NETGMCCFED PLNEKPPALI SLGGNAKLSG YDDGIPCSSL 240 SKGCDSVLVV SRDDDENFSG CVHPSTKIKP LRPITCIGDR KIKKRLASKY CKVARESKHD 300 TLSNDVLDGN LKPVYSSRKN YYKRQRSQMN IPFKKRKLFN CSSVTNSNGY FRSGGTYYSP 360 ENDMNQGVSC SSSGMCKGPG MSSLEAHQHS ALRSRDSHVK LRIKSFRVPE LFIEIPETAT 420 IGFLKKTVME AVTSVLGGGL RVGMIFHGKK VRDDTKTLLQ TGISPDNQLD ALGFTLEPNS 480 SQNLPPACAT DSLHAHSADL PQPLIGYLSS PAVIHQKSQG FLDMSGEHQV TSLGNLVESD 540 HDSAPSPINN LVEKKVTDSK ELITIPEMRV EALAVLPVHQ KSKRNEIAQR RIRRPFSVAE 600 VEALVQAVEK LGTGRWRDVK LQAFDNAKHR TYVDLKDKWK TLVHTARISP QQRRGEPVPQ 660 ELLDRVLTAH AYWSQQQTKQ QLKQQPKTCL LL

Sequence ? help Back to Top

Protein Sequence Length: 692 aa Download sequence

MVVQKRLDYS FNGNEVPTKP RTPRSARGRA TFQRRLEDNQ MCAFDLLATI AGNLLQEKQN  60
PSASSDRSSE KDRHGFVKEE CQDANKPSRA ELSDEGSSDR KCFSNLSSQA YDQNCSVKEL  120
PRCEIDGHSC IASIVTSSSC SERFVAETLV DGKSQNGMEN FAGKVELGSF GCPENSGCKL  180
DSDVSKVKDE LHKFEKVPID NETGMCCFED PLNEKPPALI SLGGNAKLSG YDDGIPCSSL  240
SKGCDSVLVV SRDDDENFSG CVHPSTKIKP LRPITCIGDR KIKKRLASKY CKVARESKHD  300
TLSNDVLDGN LKPVYSSRKN YYKRQRSQMN IPFKKRKLFN CSSVTNSNGY FRSGGTYYSP  360
ENDMNQGVSC SSSGMCKGPG MSSLEAHQHS ALRSRDSHVK LRIKSFRVPE LFIEIPETAT  420
IGFLKKTVME AVTSVLGGGL RVGMIFHGKK VRDDTKTLLQ TGISPDNQLD ALGFTLEPNS  480
SQNLPPACAT DSLHAHSADL PQPLIGYLSS PAVIHQKSQG FLDMSGEHQV TSLGNLVESD  540
HDSAPSPINN LVEKKVTDSK ELITIPEMRV EALAVLPVHQ KSKRNEIAQR RIRRPFSVAE  600
VEALVQAVEK LGTGRWRDVK LQAFDNAKHR TYVDLKDKWK TLVHTARISP QQRRGEPVPQ  660
ELLDRVLTAH AYWSQQQTKQ QLKQQPKTCL LL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07540.1	1e-123	MYB_related family protein