PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027342597.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family HB-other
Protein Properties Length: 322aa    MW: 36380.1 Da    PI: 5.3609
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027342597.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox19.81.4e-06249304654
                     S--HHHHHHHHHHHHHSSS--HHHHHHHHHHC.......TS-HHHHHHHHHHHHHH CS
        Homeobox   6 tftkeqleeLeelFeknrypsaeereeLAkkl.......gLterqVkvWFqNrRak 54 
                     +++k  +++Le+++++++ p++e+   + + +       +++ ++V  WF  +Ra 
  XP_027342597.1 249 RLKKAHIDTLERVYRRSKRPTEEMQNAMNAMIssivhvtNIPRKRVVKWFEDKRAE 304
                     5778999****************9999999999999999***************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MAMAVQCMSC ARFVPLQWQR KPLLCSLFLS LSSPSRNFNL SSSFVAATSR NKNKNKKSLA  60
PSDVSEEDAF EMLFKQLEED LKNDDLSKGD DESEEITEED IAAFERELGD ALGDFDAELL  120
NSDSSDAENG NDDDDGDDGV ESSLKLRNWQ MKKLARALKT GRRKTSIKNL AAELCLDRAL  180
VLELLRNPPP NLLMLSLSIP DEPPATVTSL ETKPSDIIHK EISTDHVESG PRAQVPIHTM  240
QRSWTAQKRL KKAHIDTLER VYRRSKRPTE EMQNAMNAMI SSIVHVTNIP RKRVVKWFED  300
KRAEEGVPDR RLPYQRSVPE TA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11270.11e-54HB-other family protein