PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027342900.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MYB
Protein Properties Length: 319aa    MW: 36252.9 Da    PI: 7.2146
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027342900.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.18.3e-181360148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg W++eEde+lv++++ +G ++W+++++  g+ R++k+c++rw +yl
   XP_027342900.1 13 RGLWSPEEDEKLVRYINTHGHKSWSSVPKFAGLQRCGKSCRLRWINYL 60
                     788*******************************************97 PP
2Myb_DNA-binding55.61.2e-1766109146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg++T+eE+++++d ++ lG++ W+ Ia++++ gRt++++k++w++
   XP_027342900.1  66 RGSFTAEEEQIIIDIHRILGNR-WAQIAKHLP-GRTDNEVKNFWNS 109
                      89********************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MGHRCCSKQK IKRGLWSPEE DEKLVRYINT HGHKSWSSVP KFAGLQRCGK SCRLRWINYL  60
RPDLKRGSFT AEEEQIIIDI HRILGNRWAQ IAKHLPGRTD NEVKNFWNSC IKKKLISQGL  120
DPQTHTLLSS HRRNTACTIS NIPQNSNSIF IMSSHMPNAP METSTQTFCS LPKAPPNIVR  180
TPSCIVSSEY QTSTIVSNKF SDLPHELLIE NNTNICSPSY MNPPSVELPN NESSVWVSRV  240
NSEDFSAQTL GEGTQVQVQQ EKDMNCEKGI DIREANKANL ETNVSFESSN FDFGLLECVL  300
NSEFMSHDLN CMDELAWNF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12720.15e-90MYB family protein