PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027343026.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family C2H2
Protein Properties Length: 421aa    MW: 47506.2 Da    PI: 8.4672
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027343026.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.90.00016368388223
                     EETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirtH 23 
                     +C+ CgksF  ++n+ +H++++
  XP_027343026.1 368 TCSLCGKSF-KPENMYKHMKSC 388
                     6********.**********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 421 aa     Download sequence    
MEAKGGEVRR LHIVYFLSHI GGHADHPHLI RVLHLARNGV YLRDVKRWLG ELRGRDLPEA  60
FAWSYKRRYK TGYVWQDLLD DDLITPISDN EYVLKGSQIH PTPYETRSLN EKKSASDIHA  120
EKKCPRVQVV EDKQQHQKQP SLAEEPHIQL DPDSKTDTPT KGSSEISQDS LVFSSDRSSM  180
TDDDSSKVEE EKLLETTGKE GFNEQNREKL ETCSLPSLYH NQMTKKGENR DDKNKTHSPD  240
SSLSTMSSPS FQSSFTKIRS NSTRVSSVFR NLITCGIVET NDAALVRMNQ DQKIFSKEPN  300
NNTPGRKAEI CKGDKLGGSA RCFGTSWNHH HHKQYGARKS FDGEETSRSR KLGELMNQTT  360
YKPFGGPTCS LCGKSFKPEN MYKHMKSCKG MKALGISTTS DESFDVAENL VCVLVKTGSQ  420
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