PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027343049.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MYB
Protein Properties Length: 332aa    MW: 37555 Da    PI: 5.2243
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027343049.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.88.2e-162976148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g W++eEde+l+++    G g+W+ Iar  g+ R++k+c++rw +yl
   XP_027343049.1 29 KGLWSPEEDEKLIRYMITKGQGCWSDIARNAGLQRCGKSCRLRWINYL 76
                     678*******************************************97 PP
2Myb_DNA-binding52.51.1e-1682126147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg+++++E+el+++++  lG++ W+ Ia++++ gRt++++k++w++ 
   XP_027343049.1  82 RGAFSPQEEELIIHLHSILGNR-WSQIAARLP-GRTDNEIKNFWNST 126
                      89********************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MRKPDLMAKD KMNNNNNNNN SNIKSKLRKG LWSPEEDEKL IRYMITKGQG CWSDIARNAG  60
LQRCGKSCRL RWINYLRPDL KRGAFSPQEE ELIIHLHSIL GNRWSQIAAR LPGRTDNEIK  120
NFWNSTLKKR LKLNNNSNSS PNNSDSSEPR DVMGGMMAMN EHDLMTMCMD SSSSTSTSSM  180
QSMHAMVLAD QFDPFPLLSN RYDMTGAAGF PDNMAACLTQ VGMVDDGVHG DYCGILEPNK  240
MGLESDFSLP PLESRSIEDN SSIPIDVKSH NNHFNNSCFN NTDHQIQSSN DNVEDLFGFE  300
NHGQGENLRM GEWDFEGLMQ DMSYFPSLDF QA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G08500.12e-69MYB family protein