PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027343099.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 295aa MW: 32761 Da PI: 6.376

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027343099.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.2	0.00028	114	136	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++ Fs++ L H++ H XP_027343099.1 114 FSCNFCKREFSSSQALGGHQNAH 136 89******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 295 aa Download sequence
MASHGLERCP SEASNISATS EDISLNDGVE EEKNDVITMK EKDGTSEKGQ ASNSNSHVML 60 DFVKLSNDDS IHGSKVELNF FNPKNVVSSS SFRANNTNEK DESNEEKTPE AKTFSCNFCK 120 REFSSSQALG GHQNAHKQER ALAKRRQGID VDAFGHPHFP YYSYPTHPFY GSYNRTLGVR 180 MESMVHKPSY HWTSPLRFGQ GWLRQEMLNP SLVRMEGLHA NNEIGNFRSG ATLRAEDDRG 240 AVGNIPFLGD SSTNVATKSN SSMDKPKLTN MGDHYSKQEE TSNPDSSGID LSLKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G10970.1	1e-27	C2H2 family protein