PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027343177.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 502aa MW: 56607.6 Da PI: 7.5338

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027343177.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.7	4.6e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+l+++++ +G g+W+ ++++ g+ R++k+c++rw +yl XP_027343177.1 14 RGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYL 61 788*******************************************97 PP
2	Myb_DNA-binding	52.4	1.3e-16	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr+T+eE++l++ ++ G++ W+ Ia++++ gRt++++k++w+++ XP_027343177.1 67 RGRFTPEEEKLIISLHGVVGNR-WAHIASHLP-GRTDNEIKNYWNSW 111 89******************.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 502 aa Download sequence
MGHHSCCNQQ KVKRGLWSPE EDEKLIRYIT THGYGCWSEV PEKAGLQRCG KSCRLRWINY 60 LRPDIRRGRF TPEEEKLIIS LHGVVGNRWA HIASHLPGRT DNEIKNYWNS WIKKKIRKPS 120 VSSTTNIAQR IDHNSQFNYN SNILDHFANQ DNLTAKPPVQ ETSFSSTCPV FMFDTSSLLG 180 TATDANSTVR AEHFQEAMGF SSETWNLNHH QVQALPPLTV TVGLDTTNYL PPLIENVENM 240 VPIEVQSCSM DEQGDIALEC LQRQELNEWV ETQQQCPNFV FWDSVEGQLG GEELAPNSSN 300 VEANTLSPFP SSFPHRLRFP VETMIIPEKN RKEICKYLFQ EGVCYAKKDF NLAKHPEIDV 360 PNLQVIKLMQ SFKSREYVRE TFAWMHYYWF LTNDGIEFLR TYLNLPSEIV PATLKKQAKP 420 PGRPFGGPPG DRPRGPPRFE GERRFGDRDG YRGGPRGPGG DFGGDKGGAP ADYRPSFGGP 480 GGRPGFGRGS GGFGAPTSSN IP

Sequence ? help Back to Top

Protein Sequence Length: 502 aa Download sequence

MGHHSCCNQQ KVKRGLWSPE EDEKLIRYIT THGYGCWSEV PEKAGLQRCG KSCRLRWINY  60
LRPDIRRGRF TPEEEKLIIS LHGVVGNRWA HIASHLPGRT DNEIKNYWNS WIKKKIRKPS  120
VSSTTNIAQR IDHNSQFNYN SNILDHFANQ DNLTAKPPVQ ETSFSSTCPV FMFDTSSLLG  180
TATDANSTVR AEHFQEAMGF SSETWNLNHH QVQALPPLTV TVGLDTTNYL PPLIENVENM  240
VPIEVQSCSM DEQGDIALEC LQRQELNEWV ETQQQCPNFV FWDSVEGQLG GEELAPNSSN  300
VEANTLSPFP SSFPHRLRFP VETMIIPEKN RKEICKYLFQ EGVCYAKKDF NLAKHPEIDV  360
PNLQVIKLMQ SFKSREYVRE TFAWMHYYWF LTNDGIEFLR TYLNLPSEIV PATLKKQAKP  420
PGRPFGGPPG DRPRGPPRFE GERRFGDRDG YRGGPRGPGG DFGGDKGGAP ADYRPSFGGP  480
GGRPGFGRGS GGFGAPTSSN IP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G63910.1	3e-98	MYB family protein