PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027343253.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

ARR-B

Protein Properties

Length: 478aa MW: 53593.1 Da PI: 6.5558

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027343253.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	87.3	1.5e-27	194	248	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 +prl+Wt++LH++F+++v+qL G++kA+Pk+ilelm+++ Lt+e+v+SHLQkYRl+ XP_027343253.1 194 RPRLVWTSTLHNHFIDVVNQL-GADKAVPKRILELMNIPNLTRENVASHLQKYRLH 248 59*****************.9*****************************97 PP
2	Myb_DNA-binding	38	3.7e-12	196	246	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r+ WT ++ ++d+v+qlG + +k+I + m+ ++t++++ s++qky+ XP_027343253.1 196 RLVWTSTLHNHFIDVVNQLGADkaVPKRILELMNiPNLTRENVASHLQKYR 246 789***********************************************7 PP
3	Response_reg	53.8	1.1e-18	26	124	7	109
SHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEE CS Response_reg 7 eplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdfls 99 + +v+e ++q++ + +++d++ al+l++e++ +D+il+D+ mp+md +e+l++ + ++p+i++++ ++ + l+ ++ Ga df + XP_027343253.1 26 DIDVLESIKQVCI-----DFITCSDSSLALNLVHERKgcFDIILIDVHMPNMDSYEFLRHVCQDI-DVPVIMMSDDNDASAKLKSINDGACDFWT 114 5555555555554.....2247899999****9999*******************9877.9************************ PP SS--HHHHHH CS Response_reg 100 Kpfdpeelvk 109 Kp pe++++ XP_027343253.1 115 KPLRPEQIRD 124 *****987 PP

Sequence ? help Back to Top
Protein Sequence Length: 478 aa Download sequence
MANSSNGDVT SSTLQAGLRI LAIDHDIDVL ESIKQVCIDF ITCSDSSLAL NLVHERKGCF 60 DIILIDVHMP NMDSYEFLRH VCQDIDVPVI MMSDDNDASA KLKSINDGAC DFWTKPLRPE 120 QIRDIWLHVA KKVLNDKKKQ DNLGSLDNNN GQNQRNGDSE VNSSVINATE GVQRNSNSNE 180 ADESENNYQP PRRRPRLVWT STLHNHFIDV VNQLGADKAV PKRILELMNI PNLTRENVAS 240 HLQKYRLHLK RKNEVTQQQN EMSVPNTVPS STETNAEVPR ETPMPNSVRS STETNADDFQ 300 ALAAAVNLPY ETLLNLPPNM MPVEAQNALR RWSNQSNIAY AHAPLNIARP LDHDSTTWPP 360 SNTIDNLVGN FDTLLQDQRQ RNQLSLLHHR VHIQPPPMTV SRSPAIHNCN FERNTLILSH 420 QPQPSSSLGG VQGAENSIFY DCVVTTDTLP SISHRRRNAI LTRGAMRCFP TIRSPGSL

Sequence ? help Back to Top

Protein Sequence Length: 478 aa Download sequence

MANSSNGDVT SSTLQAGLRI LAIDHDIDVL ESIKQVCIDF ITCSDSSLAL NLVHERKGCF  60
DIILIDVHMP NMDSYEFLRH VCQDIDVPVI MMSDDNDASA KLKSINDGAC DFWTKPLRPE  120
QIRDIWLHVA KKVLNDKKKQ DNLGSLDNNN GQNQRNGDSE VNSSVINATE GVQRNSNSNE  180
ADESENNYQP PRRRPRLVWT STLHNHFIDV VNQLGADKAV PKRILELMNI PNLTRENVAS  240
HLQKYRLHLK RKNEVTQQQN EMSVPNTVPS STETNAEVPR ETPMPNSVRS STETNADDFQ  300
ALAAAVNLPY ETLLNLPPNM MPVEAQNALR RWSNQSNIAY AHAPLNIARP LDHDSTTWPP  360
SNTIDNLVGN FDTLLQDQRQ RNQLSLLHHR VHIQPPPMTV SRSPAIHNCN FERNTLILSH  420
QPQPSSSLGG VQGAENSIFY DCVVTTDTLP SISHRRRNAI LTRGAMRCFP TIRSPGSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	3e-57	ARR-B family protein