PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027343275.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family M-type_MADS
Protein Properties Length: 186aa    MW: 20892 Da    PI: 10.5368
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027343275.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF65.27e-212168249
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                    +i+++  rqvtfskRr+g++KK +E+S+LC++++a+++fs+ +k y +
  XP_027343275.1 21 KIKDTNTRQVTFSKRRTGLFKKGNEISILCGVDIAIVVFSPGNKPYSF 68
                    699**************************************9998877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
MAIGSKKQVQ EMGRRKIEIA KIKDTNTRQV TFSKRRTGLF KKGNEISILC GVDIAIVVFS  60
PGNKPYSFGH PGVDAVAAQY LQIEPRSNEA QSGAHNNMEK LNQELAYWKE QLHMVEKKGA  120
SHFEAINQVL GTQHFELQQR IDSLQWLRSS VRDSIGDIEA AESLILLAQK PVRGVKNRVP  180
KKKGKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34440.12e-34M-type_MADS family protein