PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027343276.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family M-type_MADS
Protein Properties Length: 182aa    MW: 20712.7 Da    PI: 10.7618
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027343276.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF70.41.7e-221257449
                    -SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
          SRF-TF  4 enksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                    ++   rqvtfskRr+g++KKA+ELS+LC+aeva+++fs+ +k y +
  XP_027343276.1 12 QDANTRQVTFSKRRTGLFKKANELSILCGAEVAIVVFSPGNKPYSF 57
                    67788**********************************9998877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    
MGRRKIEIAM VQDANTRQVT FSKRRTGLFK KANELSILCG AEVAIVVFSP GNKPYSFGHP  60
GVDAVAAQYL QIEPKSNEAQ TKASSKRAKN KNNMEKLNRE LAHWKEQLHE EEKMGDLHDV  120
AINQAMGTQR FELQQRFASL QRLRSSVRGR IDEIEAAESL IQLSEKPAKK AKNRVLRKRE  180
KN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34440.15e-37M-type_MADS family protein