PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027343339.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 239aa MW: 27351.6 Da PI: 6.8644

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027343339.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.5	9.7e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W +eEd++l+ +v+++G +W++ ++ g+ R++k+c++rw++yl XP_027343339.1 14 KGAWAPEEDKKLIAYVTKYGHWNWRLLPKFAGLARCGKSCRLRWLNYL 61 799***************99**********************97 PP
2	Myb_DNA-binding	55.6	1.2e-17	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+++ +E+e +++++++lG++ W+tIa+ ++ gRt++++k++w++ XP_027343339.1 67 RGNFSHQEEETIIRLHEKLGNR-WSTIAAQLQ-GRTDNEIKNHWHTT 111 89******************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 239 aa Download sequence
MGRAPSSDKN GLKKGAWAPE EDKKLIAYVT KYGHWNWRLL PKFAGLARCG KSCRLRWLNY 60 LRPDVKRGNF SHQEEETIIR LHEKLGNRWS TIAAQLQGRT DNEIKNHWHT TLKKRFEQKS 120 DNRRGTAKTK VSKSVDANRS DNICPLSPQP SSSGLSCSTT DTTKATNHEI LVPEDDDLSF 180 LDAYTEPESA NFWTEPYVID DSYVPPGEAV VPEYFSPMCD VELWSQNDLY LQECEGLFH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31180.1	8e-61	MYB family protein