PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027343340.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 221aa MW: 25734.1 Da PI: 7.2346

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027343340.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.4	2.9e-17	12	59	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lv +v+++G +W++ ++ g+ R++k+c++rw +yl XP_027343340.1 12 KGAWTPEEDKKLVAYVTRYGHWNWTLLPKFAGLERCGKSCRLRWMNYL 59 79****************99**********************97 PP
2	Myb_DNA-binding	59.1	9.7e-19	65	110	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eEde + +++++lG++ W++Ia+ ++ gRt++++k++w+++l XP_027343340.1 65 RGNFTQEEDETIMKLIQRLGNR-WSAIAAQLP-GRTDNEIKNYWHTHL 110 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 221 aa Download sequence
MKIIPDKSGL RKGAWTPEED KKLVAYVTRY GHWNWTLLPK FAGLERCGKS CRLRWMNYLR 60 PNIKRGNFTQ EEDETIMKLI QRLGNRWSAI AAQLPGRTDN EIKNYWHTHL KKRYQQNEKS 120 EVSKSKDESP LQQMPKHADA LPSTSKSTQL SITTDHSNEY FVLEDEFALL NAYSEPLNGN 180 FWLEPYMPDI SIAPCEDLDL GAQTHCFSPL RDVPLWSHDH D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06180.1	6e-56	MYB family protein