PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027343395.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family WOX
Protein Properties Length: 197aa    MW: 22336.9 Da    PI: 9.5868
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027343395.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox63.33.4e-20867357
                    --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                     R+++tkeq+ +Le+l+++  r+p+a++++e++ +l    +++ ++V++WFqN++a++++
  XP_027343395.1  8 VRWSPTKEQISILENLYKEgIRTPNADQIQEITCRLrvygHIEGKNVFYWFQNHKARQRQ 67
                    5*****************99**************************************97 PP
2Wus_type_Homeobox114.94e-37768364
  Wus_type_Homeobox  3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
                       + RW+Pt+eQi iLe+lyk+G+rtPn+++iq+it +L+ yG+ie+kNVfyWFQN+kaR+rqk
     XP_027343395.1  7 SVRWSPTKEQISILENLYKEGIRTPNADQIQEITCRLRVYGHIEGKNVFYWFQNHKARQRQK 68
                       78***********************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
MESRNPSVRW SPTKEQISIL ENLYKEGIRT PNADQIQEIT CRLRVYGHIE GKNVFYWFQN  60
HKARQRQKEK QQSSGISFYP QQPKVLTHGS INSRTEKVVP LGMPKFRDGS QIYKQLHQKV  120
SDYNFSISKP QTLTLFPLHP TGILEGRTTE QVPSLASNSA DITDKTSGSS DIDGDGRPGN  180
QSFIDFFTSE QSSRGSD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59340.18e-39WOX family protein