PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027343425.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

LBD

Protein Properties

Length: 201aa MW: 23036.9 Da PI: 6.788

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027343425.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	123.6	9.9e-39	13	111	1	99
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 aCaaCk++r+kC ++C+lapyfp++++++f n+h+lFG+ +++++lk l++++r++a+++++y++++ra+dP G+++ i++lq+q+e ++ael+ XP_027343425.1 13 ACAACKFQRKKCGTNCILAPYFPHDRQNQFLNAHRLFGVGRITNMLKILDPQHRDIAANTIIYQSDMRAKDPAGGCYRQIHQLQSQIEYTEAELH 107 7*********************************************************************************************9 PP DUF260 96 llke 99 l+ + XP_027343425.1 108 LILQ 111 8765 PP

Sequence ? help Back to Top
Protein Sequence Length: 201 aa Download sequence
MESNLSRSYN TQACAACKFQ RKKCGTNCIL APYFPHDRQN QFLNAHRLFG VGRITNMLKI 60 LDPQHRDIAA NTIIYQSDMR AKDPAGGCYR QIHQLQSQIE YTEAELHLIL QHLAFLKASS 120 RDIINGVSQP YLESMPQDHQ QHVSYNPSHE DINMGVLQNS IPLSHSSLED NQEPVVDFRY 180 DDQKPVLDFM NKMNSDLGSH H

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13850.1	3e-44	LBD family protein