PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027343449.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family C3H
Protein Properties Length: 110aa    MW: 13039.9 Da    PI: 11.4663
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027343449.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH25.91.7e-083051425
                    ---SGGGGTS--TTTTT-SS-S CS
         zf-CCCH  4 elCrffartGtCkyGdrCkFaH 25
                    +lCr f+rt +C+yG +C++ H
  XP_027343449.1 30 KLCRLFLRTKHCPYGRSCRYLH 51
                    69******************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 110 aa     Download sequence    
METETHRLNN RNMKRFRHTH VNANLRCHPK LCRLFLRTKH CPYGRSCRYL HLHIPVPIST  60
SNAPQHTTLQ TPTNSSTTPL HNAFAVKRFF NKNELQRNSR IYADWINSFS