PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027343493.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 495aa MW: 54737.4 Da PI: 5.4784

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027343493.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.3	6.6e-17	35	82	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed lv++vk++G g+W+++ + g+ R++k+c++rw ++l XP_027343493.1 35 KGPWTPAEDAVLVEYVKKYGEGNWNSVQKNSGLLRCGKSCRLRWANHL 82 79****************************99********9986 PP
2	Myb_DNA-binding	50.2	5.8e-16	88	131	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g+++ eE++++vd++++lG++ W++ a+ ++ gRt++++k++w++ XP_027343493.1 88 KGAFSHEEEQIIVDLHAKLGNK-WARMAAQLP-GRTDNEIKNFWNT 131 799*****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 495 aa Download sequence
MARTISNNSN NDEAVTEVDT NGSKDESEAR GHLKKGPWTP AEDAVLVEYV KKYGEGNWNS 60 VQKNSGLLRC GKSCRLRWAN HLRPNLKKGA FSHEEEQIIV DLHAKLGNKW ARMAAQLPGR 120 TDNEIKNFWN TRMKRRQRAG LPLYPPEVHA EATAYHLQQQ QHYLEQQPYP SNSSSSFSLL 180 LSSCYPKKLN EPNQNHYSNA NPMQNQPDSA NCYTNPSQKF KFSNENRANV NLALPLSPVS 240 PYRSSSSTLF NQSFAPPSCS AATDSRDYQS YGDHGFIAGS PYDPIPLVPS STTEISSSQT 300 ATPASSYASG VVDGLMGPSS MVNNDYYEVA PLSPQGNSGL LDALVMEAHG LSRNDKFNGE 360 DSILAEKLSH KRKSMAGDQE YVEVGGTEPV VSTMKKSNGN TSNEAQRNDF SSSELSKGEK 420 LIGEDPLEEL NSMDDDLFSL LNHFPSEMPM PEWYRKEESQ SLGLETQPDA SSPGPTNQEF 480 AWTLGTCWKN MPGIC

Sequence ? help Back to Top

Protein Sequence Length: 495 aa Download sequence

MARTISNNSN NDEAVTEVDT NGSKDESEAR GHLKKGPWTP AEDAVLVEYV KKYGEGNWNS  60
VQKNSGLLRC GKSCRLRWAN HLRPNLKKGA FSHEEEQIIV DLHAKLGNKW ARMAAQLPGR  120
TDNEIKNFWN TRMKRRQRAG LPLYPPEVHA EATAYHLQQQ QHYLEQQPYP SNSSSSFSLL  180
LSSCYPKKLN EPNQNHYSNA NPMQNQPDSA NCYTNPSQKF KFSNENRANV NLALPLSPVS  240
PYRSSSSTLF NQSFAPPSCS AATDSRDYQS YGDHGFIAGS PYDPIPLVPS STTEISSSQT  300
ATPASSYASG VVDGLMGPSS MVNNDYYEVA PLSPQGNSGL LDALVMEAHG LSRNDKFNGE  360
DSILAEKLSH KRKSMAGDQE YVEVGGTEPV VSTMKKSNGN TSNEAQRNDF SSSELSKGEK  420
LIGEDPLEEL NSMDDDLFSL LNHFPSEMPM PEWYRKEESQ SLGLETQPDA SSPGPTNQEF  480
AWTLGTCWKN MPGIC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06100.1	5e-73	MYB family protein