PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027343582.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

MYB

Protein Properties

Length: 254aa MW: 27983.5 Da PI: 7.1646

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027343582.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.3	1.3e-16	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd l+++ k++G+g +W + +++ g++R++k+c++rw++yl XP_027343582.1 14 RGPWSPEEDATLKNYLKKHGTGgNWIALPKKAGLRRCGKSCRLRWLNYL 62 89*********************************************97 PP
2	Myb_DNA-binding	42.9	1.1e-13	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +T+eEd+ + + + G++ W+ Ia+ ++ gRt++++k++w++ XP_027343582.1 69 GGFTEEEDQVICTLYATIGSR-WSVIAAQLP-GRTDNDVKNHWNT 111 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 254 aa Download sequence
MGRAPCCDKA NVKRGPWSPE EDATLKNYLK KHGTGGNWIA LPKKAGLRRC GKSCRLRWLN 60 YLRPHIKHGG FTEEEDQVIC TLYATIGSRW SVIAAQLPGR TDNDVKNHWN TKLKKKFLAP 120 NTNAPGNTGC PQFLTSSTPQ SQVEHFVFDH ENSVKSHVLG LEQTPITAPL PLPLEPDASV 180 LGSGCKVPLA EEVSLLSNSA SFAKVNSGTQ WFGCYDHEGE DEAILLDYVY EDLLRNGFVS 240 QDNSMCNQVG PSSD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65790.1	1e-74	MYB family protein