PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027343626.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

LBD

Protein Properties

Length: 197aa MW: 21662.5 Da PI: 5.6649

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027343626.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	135.6	1.9e-42	32	131	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +CaaCk+lrr+Ca++Cvlapyfp ++p+kf +h++FGasn++k+l++lpe++r da++s+vyeA ar+rdPvyG++g i +lq+q+++l+a+la XP_027343626.1 32 PCAACKILRRRCAEKCVLAPYFPPTEPAKFTTAHRVFGASNIIKFLQELPESQRADAVASMVYEAGARIRDPVYGCAGAICQLQKQVNELQAQLA 126 7********************************************************************************************** PP DUF260 96 llkee 100 ++++e XP_027343626.1 127 KAQAE 131 *9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 197 aa Download sequence
MESDSNTPTS SPTFSHSSNS PSSSPPQVVM SPCAACKILR RRCAEKCVLA PYFPPTEPAK 60 FTTAHRVFGA SNIIKFLQEL PESQRADAVA SMVYEAGARI RDPVYGCAGA ICQLQKQVNE 120 LQAQLAKAQA ELVNMQFQQA NLVTLICMEM AQTPQESPQQ SVNNFISSPS HSTGYQNNLN 180 FLEDTTNLNS MWEPLWT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07900.1	4e-72	LBD family protein