PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027343916.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family MYB
Protein Properties Length: 222aa    MW: 25909.8 Da    PI: 8.6374
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027343916.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.65.2e-17449147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     rg W + Ed++l ++v+ +G+++W++Ia+++  gR++k+c++rw++ 
   XP_027343916.1  4 RGHWRPAEDDKLRELVEHYGPHNWNAIAEKLR-GRSGKSCRLRWFNQ 49
                     899*****************************.***********996 PP
2Myb_DNA-binding57.33.7e-1856100147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      r ++T+eE+e+lv  ++ +G++ W+ Iar ++ gRt++ +k++w+  
   XP_027343916.1  56 RSPFTEEEEERLVASHRIHGNR-WAVIARLFP-GRTDNAVKNHWHVM 100
                      789*******************.*********.***********975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MCSRGHWRPA EDDKLRELVE HYGPHNWNAI AEKLRGRSGK SCRLRWFNQL DPRINRSPFT  60
EEEEERLVAS HRIHGNRWAV IARLFPGRTD NAVKNHWHVM MARVRRERSK LYAKHPALPR  120
TNPHHNSNYD TTTFASSFVD KCSPFQFTNN LHFRVPSYCS TMLQDRSQSV EFYDFLQVNT  180
DSNKSEVTDN VKRDDEEVNQ DAAGSKNKED VSFIDFLSVG SS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17950.11e-87MYB family protein