PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027343938.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

bHLH

Protein Properties

Length: 242aa MW: 26900.9 Da PI: 8.4845

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027343938.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	42.2	1.4e-13	56	102	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+ErrRR+riN +++Lr+++P a Kl+Ka+ L ++++++k+L XP_027343938.1 56 KNHSEAERRRRARINAHLDTLRSVIPGA-----NKLDKASLLAEVIRHLKEL 102 58***********************8.....6**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 242 aa Download sequence
MEMEAFAFPV SSGVIGSGYT SSSSLILDKE KGELVEAPVK LERKVVSPER SIEALKNHSE 60 AERRRRARIN AHLDTLRSVI PGANKLDKAS LLAEVIRHLK ELKTNAAKAS EGLMIPKDND 120 EIRVEEQEGG LNGFPYSIRA SLCCEYKPGL LSDIRQALDA LHLMIIRAEI ATLGGRMNNV 180 FVIISCKEQK FEDAESRQFL AGSVHQALRS VLDRFSVSQD MLESRKRRRV SIFSSSSLGD 240 FL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	225	229	RKRRR
2	226	230	KRRRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68810.1	2e-32	bHLH family protein