PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027343983.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 337aa MW: 37890.6 Da PI: 8.005

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027343983.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.9	7.8e-05	172	191	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++Cp C k+F+r n++ H+ XP_027343983.1 172 FSCPLCFKTFNRYNNMQMHM 191 89*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 337 aa Download sequence
MTHPYCSNDF NAWFDLNSPC LISSSSSSPC SSPPFYLPSS YHHNCTSDIS FSQHQSSPPS 60 PPLKEALPLL NLSPEKGEDL ESSFSAMKVN KEKERELSIS SNRSLNDDTV TVALHLGLPS 120 TTSADLTSNV YSTEISDKEK VTVASEYSPT TINRGQYWIP TPAQILIGPT QFSCPLCFKT 180 FNRYNNMQMH MWGHGSQYRK GPESLRGTQP TAMLRLPCYC CAPGCKNNID HPRAKPLKDF 240 RTLQTHYKRK HGIKPFMCRK CCKAFAVRGD WRTHEKNCGK LWYCSCGSDF KHKRSLKDHI 300 KAFGNGHKAY GIDCLDQDDE AGSEIEQENE SLISSHN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-130	C2H2 family protein