PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027344020.1

Organism

Abrus precatorius

Taxonomic ID

3816

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus

Family

C2H2

Protein Properties

Length: 344aa MW: 38495.3 Da PI: 6.8942

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027344020.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	19.1	3.5e-06	183	202	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++C+ C+k+F+r nL+ H+ XP_027344020.1 183 FSCSVCSKTFNRYNNLQMHM 202 89*****************9 PP
2	zf-C2H2	14.2	0.00013	267	289	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y C +C+k F k + ++H +++ XP_027344020.1 267 YMCRKCDKAFAVKGDWRTHEKNC 289 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
MTDPQSNLYS GCFNFMPLHS HYTSFTNSQS NLFSSYPFPY SNDNTFSIQS EPSSLLAPPS 60 SPPLREALPL INNISLTNQK ENEPSNSTSA VEEEGEKKKD KDESLLMTST EEVDDEAVTV 120 ALSIGLPSMA ASDLLGSREM STCAQMGEKG EVNVISGHPL DRLNKVQYWI PSPSQILIGP 180 TQFSCSVCSK TFNRYNNLQM HMWGHGSQYR KGPDSLKGTQ PSAMLRLPCF CCAPGCKHNI 240 DHPRARPLKD FRTLQTHYKR KHGIKPYMCR KCDKAFAVKG DWRTHEKNCG KIWYCLCGSD 300 FKHKRSLKDH IKAFGHGHGA IDIDCMQEED EGASEIEHDG ESSM

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

MTDPQSNLYS GCFNFMPLHS HYTSFTNSQS NLFSSYPFPY SNDNTFSIQS EPSSLLAPPS  60
SPPLREALPL INNISLTNQK ENEPSNSTSA VEEEGEKKKD KDESLLMTST EEVDDEAVTV  120
ALSIGLPSMA ASDLLGSREM STCAQMGEKG EVNVISGHPL DRLNKVQYWI PSPSQILIGP  180
TQFSCSVCSK TFNRYNNLQM HMWGHGSQYR KGPDSLKGTQ PSAMLRLPCF CCAPGCKHNI  240
DHPRARPLKD FRTLQTHYKR KHGIKPYMCR KCDKAFAVKG DWRTHEKNCG KIWYCLCGSD  300
FKHKRSLKDH IKAFGHGHGA IDIDCMQEED EGASEIEHDG ESSM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-119	C2H2 family protein