PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027344090.1
Organism
Abrus precatorius
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Abreae; Abrus
Family HD-ZIP
Protein Properties Length: 719aa    MW: 79332.9 Da    PI: 6.8497
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027344090.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox642.1e-202580156
                    TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox  1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                    r++ +++t++q+++Le++F+++++p++++r +L+++lgL  rq+k+WFqNrR+++k
  XP_027344090.1 25 RKRYHRHTANQIQRLESMFKECPHPDEKQRMQLSRELGLAPRQIKFWFQNRRTQMK 80
                    789999***********************************************998 PP
2START172.62.6e-542304542206
                     HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS.......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv......dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                     +a  a++el+++   +ep+W+ks     + +n d++ + f++ ++       ++ea+r+s+vv  ++  l   ++d + +W e ++    +a t+
  XP_027344090.1 230 IASNAMEELLRLLHTNEPLWMKSNtdgrDVLNFDTYERMFPKPNArpknpnVRVEASRDSRVVSINSLALADMFMDPN-KWMELFPtivsAARTV 323
                     67889*******************9999999999999999988889999999****************6666666666.****9999999***** PP

                     EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-E CS
           START  83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehv 170
                     +vissg      g lqlm+ el +lsplv+ R+f+f+Ry++q ++ +w+ivdvS d +q++   ++  R++++pSg+li++++nghsk+twvehv
  XP_027344090.1 324 QVISSGmmgscsGSLQLMYEELLVLSPLVStREFYFLRYCQQIEQSTWAIVDVSYDFPQDNH-FAPQFRSHRRPSGCLIQDMPNGHSKITWVEHV 417
                     *************************************************************9.8******************************* PP

                     E--SS.XXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
           START 171 dlkgr.lphwllrslvksglaegaktwvatlqrqcek 206
                     + +++ lph l+r l+ sgla+ga +w+atlqr ce+
  XP_027344090.1 418 EIEDKtLPHRLYRTLIYSGLAFGAERWLATLQRMCER 454
                     **876267***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 719 aa     Download sequence    
MEYGGGGSGS QSPGEQDGSD SQGRRKRYHR HTANQIQRLE SMFKECPHPD EKQRMQLSRE  60
LGLAPRQIKF WFQNRRTQMK AQHERADNCA LRADNDKIRC ENIAIREALK NVICPSCGAP  120
PLNDDSYFDD QKLRLENAHL KEELDRVSSI AAKYIGRPIS QLPPVQPMHI SSLDLSMASF  180
GNQGMVGPGP GPAPSLNLDL LPAGTSSSVP NLPYQPPCLS DMDKSLVSDI ASNAMEELLR  240
LLHTNEPLWM KSNTDGRDVL NFDTYERMFP KPNARPKNPN VRVEASRDSR VVSINSLALA  300
DMFMDPNKWM ELFPTIVSAA RTVQVISSGM MGSCSGSLQL MYEELLVLSP LVSTREFYFL  360
RYCQQIEQST WAIVDVSYDF PQDNHFAPQF RSHRRPSGCL IQDMPNGHSK ITWVEHVEIE  420
DKTLPHRLYR TLIYSGLAFG AERWLATLQR MCERLNCLMV TSSHTGDLGG VISSPEGKRS  480
MMKLAQRMVT NFCASISTSS GHRWTTLSGL NEIGVRVTVQ KSTDPGQPNG VVLSAATTIW  540
LPMPPHTVFN FFKDERKRPQ WDVLSNGNAV QEVAHIANGS HPGNSISVLR AFNTSQNNML  600
ILQESCIDSS GSLVVYCPVD LPSINIAMSG EDPSYIPLLP SGFTISPDGQ AEQEGDGAST  660
SSNANRNIGS SGGSLVTVAF QILVSSLPSA KLNMESVTTV NNLIGSTIQQ IKASLSCPT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73360.10.0HD-ZIP family protein